SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID:
Gene: LOC100130872-SPON2 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_016900039 chr4:1129483-1176449 Sample_02_0169 Prostate LNCaP_R1881 39 7 1537 183 2 22 1929 SPON2,LOC100130872-SPON2,RNF212,TMED11P
SE_02_017000050 chr4:1129636-1176864 Sample_02_0170 Prostate LNCaP_R1881_DOX 50 5 1559 183 2 22 1929 SPON2,LOC100130872-SPON2,RNF212,TMED11P
SE_02_016800047 chr4:1150540-1194934 Sample_02_0168 Prostate LNCaP 47 3 1333 129 2 29 1980 SPON2,LOC100130872-SPON2,RNF212,TMED11P
SE_01_002200058 chr4:1150830-1173750 Sample_01_0022 Prostate C4-2B 58 6 720 74 2 22 1929 SPON2,LOC100130872-SPON2,RNF212,TMED11P
SE_01_006800020 chr4:1151073-1176449 Sample_01_0068 Prostate: derived from metastatic site: vertebral metastasis VCaP 20 6 788 81 2 22 1929 SPON2,LOC100130872-SPON2,RNF212,TMED11P
SE_02_014400428 chr4:1153945-1229010 Sample_02_0144 Peripheral blood MV411_DMSO 428 9 2586 221 1 109 6355 LOC100130872,SPON2,CTBP1,LOC100130872-SPON2,RNF212,TMED11P,C4ORF42
SE_02_025600350 chr4:1153980-1229229 Sample_02_0256 Peripheral blood MV411 350 9 2602 222 1 109 6405 LOC100130872,SPON2,CTBP1,LOC100130872-SPON2,RNF212,TMED11P,C4ORF42
SE_00_002700273 chr4:1166171-1220050 Sample_00_0027 Blood natural-killer-cell 273 8 1805 149 0 109 4630 LOC100130872,SPON2,CTBP1,LOC100130872-SPON2,TMED11P,C4ORF42
SE_02_002400099 chr4:1166431-1217494 Sample_02_0024 Blood CD56+ Natural Killer cells donor A 99 21 1707 143 0 109 4332 LOC100130872,SPON2,CTBP1,LOC100130872-SPON2,TMED11P,C4ORF42
SE_02_038000223 chr4:1166618-1211393 Sample_02_0380 Skeletal muscle RH18 223 7 1466 130 0 47 3226 LOC100130872,SPON2,LOC100130872-SPON2,TMED11P,C4ORF42,CTBP1
SE_00_000900951 chr4:1166699-1217760 Sample_00_0009 Blood CD8-positive-alpha-beta-T-cell 951 7 1716 141 0 109 4379 LOC100130872,SPON2,CTBP1,LOC100130872-SPON2,TMED11P,C4ORF42
SE_02_005500139 chr4:1166944-1211109 Sample_02_0055 Lung IMR-90_Nutlin-3a 139 8 1445 128 0 47 3148 LOC100130872,SPON2,LOC100130872-SPON2,TMED11P,C4ORF42,CTBP1
SE_01_007500505 chr4:1166979-1220305 Sample_01_0075 Esophagus squamous epithelium esophagus-squamous-epithelium 505 9 1786 146 0 109 4620 LOC100130872,SPON2,CTBP1,LOC100130872-SPON2,TMED11P,C4ORF42
SE_02_036700427 chr4:1167008-1212777 Sample_02_0367 Skeletal muscle NS129 427 8 1496 129 0 85 3459 LOC100130872,SPON2,CTBP1,LOC100130872-SPON2,TMED11P,C4ORF42
SE_02_005400144 chr4:1167044-1211065 Sample_02_0054 Lung IMR-90_DMSO_1 144 8 1438 128 0 47 3119 LOC100130872,SPON2,LOC100130872-SPON2,TMED11P,C4ORF42,CTBP1
SE_02_024000770 chr4:1167075-1202512 Sample_02_0240 Colon V429_2 770 5 1126 104 0 36 2587 LOC100130872,SPON2,LOC100130872-SPON2,TMED11P,C4ORF42,CTBP1
SE_01_009100121 chr4:1167076-1217034 Sample_01_0091 Uterus uterus 121 8 1663 139 0 109 4159 LOC100130872,SPON2,CTBP1,LOC100130872-SPON2,TMED11P,C4ORF42
SE_02_028200039 chr4:1167082-1211459 Sample_02_0282 Lung IMR-90 39 9 1448 128 0 47 3176 LOC100130872,SPON2,CTBP1,LOC100130872-SPON2,TMED11P,C4ORF42
SE_00_004200591 chr4:1167131-1210759 Sample_00_0042 Stomach stomach_30y 591 6 1420 125 0 47 3037 LOC100130872,SPON2,LOC100130872-SPON2,TMED11P,C4ORF42,CTBP1
SE_02_002300368 chr4:1167257-1204422 Sample_02_0023 Blood CD8donorC 368 7 1179 106 0 36 2549 LOC100130872,SPON2,LOC100130872-SPON2,TMED11P,C4ORF42,CTBP1
SE_02_027800303 chr4:1170261-1211626 Sample_02_0278 Retina FW24 303 4 1328 115 0 53 2523 LOC100130872,SPON2,CTBP1,LOC100130872-SPON2,TMED11P,C4ORF42
SE_00_001500096 chr4:1171238-1211726 Sample_00_0015 Lung IMR-90 96 6 1289 109 0 44 2293 LOC100130872,SPON2,CTBP1,LOC100130872-SPON2,TMED11P,C4ORF42
SE_02_021100955 chr4:1178294-1202664 Sample_02_0211 Lung MRC-5_NFD_1DPT 955 6 734 63 0 14 1109 LOC100130872,LOC100130872-SPON2,SPON2,C4ORF42,CTBP1
SE_02_036400336 chr4:1178440-1211557 Sample_02_0364 Skeletal muscle CTR 336 2 1050 87 0 30 1705 LOC100130872,LOC100130872-SPON2,SPON2,CTBP1,C4ORF42
SE_02_027400441 chr4:1182803-1203711 Sample_02_0274 Endometriosis hTERT_KD 441 4 657 59 0 14 1058 LOC100130872,LOC100130872-SPON2,SPON2,C4ORF42,CTBP1
SE_01_008500802 chr4:1183576-1220280 Sample_01_0085 Stomach stomach 802 6 1261 98 0 87 3070 LOC100130872,LOC100130872-SPON2,SPON2,CTBP1,C4ORF42
SE_01_008900702 chr4:1183718-1217810 Sample_01_0089 Transverse colon transverse-colon 702 6 1178 91 0 87 2795 LOC100130872,LOC100130872-SPON2,SPON2,CTBP1,C4ORF42
SE_01_007900453 chr4:1183771-1218146 Sample_01_0079 Peyers patch Peyers-patch 453 5 1188 91 0 87 2828 LOC100130872,LOC100130872-SPON2,SPON2,CTBP1,C4ORF42
SE_01_009000725 chr4:1191181-1219239 Sample_01_0090 Lung upper-lobe-of-left-lung 725 4 1014 77 0 87 2955 LOC100130872,LOC100130872-SPON2,SPON2,CTBP1,C4ORF42
SE_00_004300745 chr4:1191182-1215908 Sample_00_0043 Stomach stomach_96d 745 4 878 70 0 78 2383 LOC100130872,LOC100130872-SPON2,SPON2,CTBP1,C4ORF42
SE_00_003500083 chr4:1191308-1217778 Sample_00_0035 Sigmoid colon sigmoid-colon 83 8 959 72 0 87 2794 LOC100130872,LOC100130872-SPON2,SPON2,CTBP1,C4ORF42
SE_01_002900382 chr4:1191331-1203536 Sample_01_0029 Lung fibroblast-of-lung 382 3 419 37 0 14 1058 LOC100130872,LOC100130872-SPON2,SPON2,C4ORF42,CTBP1
SE_02_008900294 chr4:1191339-1203505 Sample_02_0089 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_SGA_cycle_3 294 3 418 37 0 14 1058 LOC100130872,LOC100130872-SPON2,SPON2,C4ORF42,CTBP1
SE_02_018200891 chr4:1191362-1203769 Sample_02_0182 melanoma LOX-IMVI 891 2 424 38 0 14 1058 LOC100130872,LOC100130872-SPON2,SPON2,C4ORF42,CTBP1
SE_00_002300803 chr4:1191446-1210607 Sample_00_0023 Embryo mesenchymal-stem-cell 803 4 677 56 0 25 1477 LOC100130872,LOC100130872-SPON2,SPON2,C4ORF42,CTBP1
SE_02_009300660 chr4:1191506-1203536 Sample_02_0093 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_Control_cycle_6 660 3 417 37 0 14 1058 LOC100130872,LOC100130872-SPON2,SPON2,C4ORF42,CTBP1
SE_00_001100820 chr4:1191508-1232486 Sample_00_0011 Esophagus esophagus 820 8 1619 134 0 87 5244 LOC100130872,LOC100130872-SPON2,SPON2,CTBP1,C4ORF42
SE_02_009000161 chr4:1191553-1203553 Sample_02_0090 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_SGA_cycle_6 161 4 417 37 0 14 1058 LOC100130872,LOC100130872-SPON2,SPON2,C4ORF42,CTBP1
SE_01_002500468 chr4:1196187-1217895 Sample_01_0025 Haematopoietic and lymphoid tissue blood DND-41 468 4 821 54 0 80 2656 LOC100130872,LOC100130872-SPON2,SPON2,CTBP1,C4ORF42
SE_02_012800475 chr4:1199168-1207402 Sample_02_0128 Haematopoietic and lymphoid tissue ALL-SIL 475 1 305 20 0 7 636 LOC100130872,LOC100130872-SPON2,SPON2,C4ORF42,CTBP1
SE_02_003100795 chr4:1199373-1218218 Sample_02_0031 Haematopoietic and lymphoid tissue blood Jurkat 795 2 712 44 0 76 2290 LOC100130872,LOC100130872-SPON2,SPON2,CTBP1,C4ORF42
SE_02_012300315 chr4:1200009-1222276 Sample_02_0123 Haematopoietic and lymphoid tissue GRANTA-519 315 2 851 57 0 76 2711 LOC100130872,LOC100130872-SPON2,SPON2,CTBP1,C4ORF42
SE_01_002200096 chr4:1207946-1214855 Sample_01_0022 Prostate C4-2B 96 1 253 18 0 60 1133 LOC100130872,LOC100130872-SPON2,SPON2,CTBP1,C4ORF42
SE_02_016800618 chr4:1208228-1215331 Sample_02_0168 Prostate LNCaP 618 1 261 20 0 54 1133 LOC100130872,LOC100130872-SPON2,SPON2,CTBP1,C4ORF42
SE_02_016900427 chr4:1208287-1225070 Sample_02_0169 Prostate LNCaP_R1881 427 3 675 47 0 63 2822 LOC100130872,LOC100130872-SPON2,SPON2,CTBP1,C4ORF42
SE_02_016200306 chr4:1208755-1214036 Sample_02_0162 Prostate C4-2B_vehicle_24h 306 2 187 16 0 49 898 LOC100130872,LOC100130872-SPON2,SPON2,CTBP1,C4ORF42
Genomic distribution of SEs associated with LOC100130872-SPON2
Genome Browser

The strength of the tissue affected by the gene

Expression of LOC100130872-SPON2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)