SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_016900427
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Prostate
Biosample name: LNCaP_R1881
Genomic region: chr4:1208287-1225070
Size: 16783
Super-enhancer rank 427
Number of SE elements: 3
ChIP density(Case|Control): 36513.0948|1223.4807
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SPON2;
ROSE Overlap LOC100130872; LOC100130872-SPON2; SPON2; CTBP1;
ROSE Proximal SPON2; C4orf42;
ROSE Closest LOC100130872;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_016900427 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers