Gene overview
| Strategies/Algorithm: | overlap | Ensembl ID: | ENSG00000250930 |
| Gene: | LNX1-AS1 | Gene type: | lncRNA |
| Strand: | + | External links: |
|
| Genomic region: | chr4:53496400-53549578 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_044401085 | chr4:53450472-53547020 |
Sample_02_0444 | Bone | osteosarcoma tumor P10 | 1085 | 31 | 2553 | 248 | 14 | 246 | 1122 | LNX1-AS1,LNX1,FIP1L1,LNX1-AS2 |
| SE_02_155200189 | chr4:53451019-53511545 |
Sample_02_1552 | HMSCs | hMSC ATCC SCRC-4000 | 189 | 20 | 1595 | 179 | 5 | 160 | 1057 | LNX1-AS1,LNX1,FIP1L1 |
| SE_02_131100234 | chr4:53453604-53511618 |
Sample_02_1311 | Bone marrow | HDMSCs | 234 | 9 | 1536 | 177 | 5 | 147 | 891 | LNX1-AS1,LNX1,FIP1L1 |
| SE_02_131000262 | chr4:53474395-53511671 |
Sample_02_1310 | Bone marrow | ASMSCs | 262 | 5 | 933 | 135 | 3 | 122 | 685 | LNX1-AS1,LNX1 |
| SE_02_142800435 | chr4:53474416-53511633 |
Sample_02_1428 | Shoulder | fibroblast_316 | 435 | 10 | 933 | 135 | 3 | 122 | 685 | LNX1-AS1,LNX1 |
| SE_02_086800217 | chr4:53474453-53510895 |
Sample_02_0868 | Bone marrow | Bone marrow derived hMSC_d10 | 217 | 31 | 908 | 127 | 3 | 113 | 685 | LNX1-AS1,LNX1 |
| SE_02_056900863 | chr4:53474485-53510842 |
Sample_02_0569 | Periodontal ligament | mesenchymal stem cell | 863 | 12 | 903 | 126 | 3 | 113 | 685 | LNX1-AS1,LNX1 |
| SE_02_142600463 | chr4:53474811-53511759 |
Sample_02_1426 | Shoulder | fibroblast_341 | 463 | 13 | 925 | 133 | 3 | 122 | 685 | LNX1-AS1,LNX1 |
| SE_02_142700423 | chr4:53474862-53513070 |
Sample_02_1427 | Shoulder | fibroblast_343 | 423 | 20 | 952 | 139 | 3 | 125 | 685 | LNX1-AS1,LNX1 |
| SE_02_142500298 | chr4:53474888-53511603 |
Sample_02_1425 | Shoulder | fibroblast_384 | 298 | 18 | 915 | 131 | 3 | 122 | 685 | LNX1-AS1,LNX1 |
| SE_02_156601031 | chr4:53474946-53508454 |
Sample_02_1566 | Dermal | Dermal fibroblast | 1031 | 6 | 825 | 111 | 3 | 104 | 685 | LNX1-AS1,LNX1 |
| SE_02_046600262 | chr4:53475749-53547097 |
Sample_02_0466 | Adipose | visceral adipocytes | 262 | 45 | 1838 | 195 | 12 | 208 | 750 | LNX1-AS1,LNX1,LNX1-AS2 |
| SE_02_095800022 | chr4:53486424-53559428 |
Sample_02_0958 | Brain | H3.3K27M_Tumor_BT245-X0-2-Rx_xenograft | 22 | 17 | 1936 | 183 | 12 | 198 | 638 | LNX1-AS1,LNX1,LNX1-AS2 |
| SE_02_105000591 | chr4:53506490-53509400 |
Sample_02_1050 | Highly metastatic osteosarcoma | MG63-3_DMSO | 591 | 1 | 83 | 5 | 0 | 21 | 150 | LNX1-AS1,LNX1 |
| SE_02_043900863 | chr4:53507233-53509264 |
Sample_02_0439 | Bone | Hu09 | 863 | 1 | 62 | 4 | 0 | 20 | 138 | LNX1-AS1,LNX1 |
| SE_02_074400422 | chr4:53519002-53527777 |
Sample_02_0744 | Embryo | ES derived cardiac mesoderm_day5 | 422 | 6 | 242 | 11 | 2 | 27 | 65 | LNX1-AS1,LNX1 |
Genomic distribution of SEs associated with LNX1-AS1