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Super-enhancer overview

SE ID: SE_02_095800022
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Brain
Biosample name: H3.3K27M_Tumor_BT245-X0-2-Rx_xenograft
Genomic region: chr4:53486424-53559428
Size: 73004
Super-enhancer rank 22
Number of SE elements: 17
ChIP density(Case|Control): 196461.0644|107797.7064
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LNX1-AS1;
ROSE Overlap LNX1-AS1; LNX1;
ROSE Proximal LNX1-AS2;
ROSE Closest LNX1-AS1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_095800022 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers