SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000171989
Gene: LDHAL6B Gene type: protein_coding
Strand: + External links:
Genomic region: chr15:59206843-59208588 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_045100111 chr15:59147864-59233450 Sample_02_0451 Skin in vitro transformedskin fibroblasts_tumourigenic 111 15 2976 229 15 216 1489 MYO1E,LDHAL6B,MIR2116,CCNB2
SE_02_076600340 chr15:59148772-59210355 Sample_02_0766 Ovary PEO1 340 18 2186 188 13 145 1085 MYO1E,LDHAL6B,MIR2116,CCNB2
SE_02_158000415 chr15:59161472-59250108 Sample_02_1580 Renal 786-O 415 29 3044 237 14 211 1295 MYO1E,LDHAL6B,MIR2116
SE_02_141600554 chr15:59162753-59241131 Sample_02_1416 Brain SF9402 554 14 2696 217 14 207 1295 MYO1E,LDHAL6B,MIR2116
SE_02_046600344 chr15:59162969-59233222 Sample_02_0466 Adipose visceral adipocytes 344 44 2427 207 14 179 1251 MYO1E,LDHAL6B,MIR2116,CCNB2
SE_02_143700565 chr15:59162996-59244100 Sample_02_1437 Liver LSEC-TNF 565 26 2789 226 14 209 1293 MYO1E,LDHAL6B,MIR2116
SE_02_131000300 chr15:59164453-59241198 Sample_02_1310 Bone marrow ASMSCs 300 13 2638 210 13 200 1248 MYO1E,LDHAL6B,MIR2116
SE_02_127900717 chr15:59164600-59247796 Sample_02_1279 Bone Mesenchymal stem cells 717 18 2849 221 13 203 1248 MYO1E,LDHAL6B,MIR2116
SE_02_026500221 chr15:59164944-59233812 Sample_02_0265 Skeletal muscle 7250-PAX3-FOXO1 221 7 2385 200 13 172 1204 MYO1E,MIR2116,LDHAL6B
SE_02_155200294 chr15:59165065-59233256 Sample_02_1552 HMSCs hMSC ATCC SCRC-4000 294 28 2356 197 13 172 1204 MYO1E,LDHAL6B,MIR2116
SE_02_156601076 chr15:59165258-59233243 Sample_02_1566 Dermal Dermal fibroblast 1076 16 2346 197 13 172 1204 MYO1E,LDHAL6B,MIR2116
SE_02_088601036 chr15:59165298-59233385 Sample_02_0886 Skin foreskin_ p63KLF4 1036 13 2350 197 13 172 1204 MYO1E,LDHAL6B,MIR2116
SE_02_061600071 chr15:59165417-59331568 Sample_02_0616 Liposarcoma liposarcoma cells_LP6 71 49 5698 325 19 367 1351 MYO1E,LDHAL6B,MIR2116
SE_02_008200008 chr15:59165482-59213189 Sample_02_0082 Oral cavity KB_IL-1alpha 8 5 1682 166 12 112 830 MYO1E,MIR2116,LDHAL6B
SE_02_093000164 chr15:59165530-59322176 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 164 63 5394 303 19 344 1351 MYO1E,LDHAL6B,MIR2116
SE_02_158400369 chr15:59165613-59247920 Sample_02_1584 Brain U87 GBM_Mock 369 18 2812 219 13 203 1248 MYO1E,LDHAL6B,MIR2116
SE_02_157100689 chr15:59165931-59233264 Sample_02_1571 Fibroblast Fibroblast cells 689 11 2316 196 13 171 1204 MYO1E,LDHAL6B,MIR2116
SE_02_061900544 chr15:59165977-59208922 Sample_02_0619 Head and Neck HPV+ HNSCC_SCC-047 544 15 1505 142 11 105 780 MYO1E,LDHAL6B,MIR2116
SE_02_144500593 chr15:59166169-59239185 Sample_02_1445 Adipose SW872_TAZ4SA 593 15 2505 199 12 185 1248 MYO1E,LDHAL6B,MIR2116
SE_02_081601559 chr15:59166726-59233118 Sample_02_0816 Ovary Clear cell ovarian cancer 1559 16 2291 191 11 170 1204 MYO1E,LDHAL6B,MIR2116
SE_02_008300002 chr15:59167814-59213112 Sample_02_0083 Oral cavity KB_untreat 2 4 1601 161 10 110 830 MYO1E,MIR2116,LDHAL6B
SE_02_008400002 chr15:59167856-59239108 Sample_02_0084 Oral cavity KB_5Z-7-oxozeaenol 2 5 2451 198 11 184 1248 MYO1E,MIR2116,LDHAL6B
SE_02_063600587 chr15:59168151-59233295 Sample_02_0636 Skin BJ5ta 587 14 2252 190 11 170 1204 MYO1E,LDHAL6B,MIR2116
SE_02_124100540 chr15:59169043-59233175 Sample_02_1241 Skin MCC26_virus_negative 540 11 2224 186 11 170 1204 MYO1E,LDHAL6B,MIR2116
SE_02_078000110 chr15:59174649-59335846 Sample_02_0780 Liver SMMC-7721 110 50 5505 305 16 360 1107 MYO1E,LDHAL6B,MIR2116
SE_02_008500007 chr15:59188722-59213138 Sample_02_0085 Oral cavity KB_IL-1alpha_5Z-7-oxozeaenol 7 1 847 102 3 70 450 MYO1E,LDHAL6B,MIR2116
SE_02_093700844 chr15:59190660-59213103 Sample_02_0937 Retinal Pigmented Epithelial RPE190_Con 844 9 795 98 3 70 450 MYO1E,LDHAL6B,MIR2116
SE_02_098900428 chr15:59190865-59336285 Sample_02_0989 Kidney kidney cortex_WT 428 47 4936 262 10 334 971 MYO1E,LDHAL6B,MIR2116
Genomic distribution of SEs associated with LDHAL6B
Genome Browser

The strength of the tissue affected by the gene

Expression of LDHAL6B

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)