SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000176160
Gene: HSF5 Gene type: protein_coding
Strand: - External links:
Genomic region: chr17:58420167-58488408 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_042700038 chr17:58350501-58429440 Sample_02_0427 Colon HCT116_shPAF1 38 4 1738 148 19 422 2059 RNF43,SUPT4H1,HSF5,BZRAP1,MIR142
SE_02_032400025 chr17:58351198-58422832 Sample_02_0324 Colon SW48 25 7 1582 140 18 417 2059 RNF43,SUPT4H1,HSF5,BZRAP1,MIR142
SE_02_143400134 chr17:58354551-58428995 Sample_02_1434 Trophoblast trophoblast stem cells 134 10 1615 133 16 387 1509 RNF43,HSF5,BZRAP1-AS1,MIR4736,MIR142,BZRAP1,SUPT4H1
SE_02_142900253 chr17:58367183-58428985 Sample_02_1429 Blood GM12878_WT 253 13 1309 112 11 299 525 RNF43,HSF5,BZRAP1-AS1,MIR4736,MIR142,BZRAP1,SUPT4H1,MKS1,MTMR4
SE_02_070900063 chr17:58369281-58428505 Sample_02_0709 Pancreas hT85_organoid 63 20 1240 102 11 296 525 RNF43,HSF5,BZRAP1-AS1,MIR4736,MIR142,BZRAP1,SUPT4H1
SE_02_042600134 chr17:58382773-58429571 Sample_02_0426 Colon HCT116_NONT 134 3 964 77 9 240 445 RNF43,HSF5,SUPT4H1
SE_02_035200334 chr17:58383251-58429126 Sample_02_0352 Colon HCT116 334 11 944 76 9 236 445 RNF43,HSF5,SUPT4H1
SE_02_045800035 chr17:58384596-58428476 Sample_02_0458 Colon HCT116 DMSO 35 13 901 73 9 230 445 RNF43,HSF5,SUPT4H1,BZRAP1-AS1,MIR4736
SE_02_124700053 chr17:58388603-58428925 Sample_02_1247 Colon HCT116_IFN-beta_1h 53 14 821 72 9 211 445 RNF43,HSF5,SUPT4H1
SE_02_135101041 chr17:58407816-58428912 Sample_02_1351 Mammary gland MDA-MB-231-Erbeta_vehicle 1041 3 417 27 5 111 445 RNF43,HSF5
Genomic distribution of SEs associated with HSF5
Genome Browser

The strength of the tissue affected by the gene

Expression of HSF5

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)