SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000170144
Gene: HNRNPA3 Gene type: protein_coding
Strand: + External links:
Genomic region: chr2:177212563-177223958 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_141300269 chr2:177161975-177215306 Sample_02_1413 Muscle RH4_sgBRG1 269 10 1325 53 2 133 155 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_02_077502340 chr2:177189917-177214835 Sample_02_0775 Pancreas EndoC-BH1_SE 2340 5 627 17 0 56 155 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_02_032601105 chr2:177201325-177217970 Sample_02_0326 Liver hepatocytes_d3 1105 4 465 8 0 93 371 HNRNPA3,MIR3128,NFE2L2
SE_02_028400336 chr2:177201697-177245701 Sample_02_0284 Pelvis patient 119 336 6 1131 30 1 201 1111 NFE2L2,HNRNPA3,MIR3128
SE_02_012500145 chr2:177202863-177219644 Sample_02_0125 Embryo Embryonic-stem-cells_Primed 145 3 468 6 0 95 445 HNRNPA3,MIR3128,NFE2L2
SE_01_003300105 chr2:177203272-177214834 Sample_01_0033 Embryo H9 105 2 303 5 0 54 155 HNRNPA3,MIR3128,NFE2L2
SE_02_006500569 chr2:177203685-177222131 Sample_02_0065 Embryo KO2-Late_G1 569 3 490 7 0 139 611 HNRNPA3,MIR3128,NFE2L2
SE_02_006700692 chr2:177203906-177215104 Sample_02_0067 Embryo AzH-G2/M 692 2 306 4 0 54 155 HNRNPA3,MIR3128,NFE2L2
SE_02_006400442 chr2:177204058-177219274 Sample_02_0064 Embryo DN-Early_G1 442 4 440 5 0 93 421 HNRNPA3,MIR3128,NFE2L2
SE_02_101700570 chr2:177204363-177249033 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 570 10 1177 31 1 202 1111 NFE2L2,HNRNPA3,MIR4444-2,MIR4444-1,MIR3128
SE_02_003601620 chr2:177204688-177224524 Sample_02_0036 Embryo H7 1620 5 553 14 1 145 783 HNRNPA3,MIR3128,NFE2L2
SE_02_086000515 chr2:177204699-177214848 Sample_02_0860 iPSCs SAH_SMARCB1_K364del/+ 515 2 279 4 0 54 155 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_02_067201050 chr2:177204783-177215474 Sample_02_0672 Endometrium endometrium cancer_DSG 1050 4 305 5 0 54 167 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_02_139300671 chr2:177206034-177215152 Sample_02_1393 Lymph node anaplastic large cell lymphoma cells_ALK+#54 671 2 258 3 0 54 155 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_01_002100636 chr2:177206179-177214419 Sample_01_0021 Skin bipolar-neuron 636 2 236 3 0 54 155 HNRNPA3,MIR3128,NFE2L2
SE_02_146001067 chr2:177207157-177222646 Sample_02_1460 Blood Mutz-3 1067 4 440 8 0 139 665 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_02_002300515 chr2:177209788-177215169 Sample_02_0023 Blood CD8donorC 515 2 178 0 0 54 155 HNRNPA3,MIR3128,NFE2L2
SE_02_092800429 chr2:177210309-177215294 Sample_02_0928 Peripheral blood neutrophils_Ecoli 429 1 168 1 0 54 155 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_01_008501105 chr2:177210427-177215573 Sample_01_0085 Stomach stomach 1105 1 184 1 0 55 176 HNRNPA3,MIR3128,NFE2L2
SE_02_153000951 chr2:177210448-177215464 Sample_02_1530 Peripheral blood neutrophils_0BA0X 951 1 172 1 0 54 167 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_02_143100198 chr2:177210449-177216382 Sample_02_1431 Blood T cell 198 1 202 1 0 81 230 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_00_000800358 chr2:177210454-177217856 Sample_00_0008 Blood CD4-positive-alpha-beta-memory-T-cell 358 1 261 1 0 93 368 HNRNPA3,MIR3128,NFE2L2
SE_02_040700520 chr2:177210475-177216982 Sample_02_0407 Brain BT16 520 1 222 1 0 93 301 HNRNPA3,MIR3128,NFE2L2
SE_02_061700729 chr2:177210481-177216617 Sample_02_0617 HSPC FL CD34+CD38-/lowCD90+ HSPC 729 2 212 1 0 86 247 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_02_021200188 chr2:177210492-177229884 Sample_02_0212 Burkitts lymphoma of the left maxilla Raji_DMSO 188 4 574 16 1 145 783 HNRNPA3,MIR3128,NFE2L2
SE_01_002000521 chr2:177210505-177215547 Sample_01_0020 Blood B-cell 521 2 183 1 0 54 173 HNRNPA3,MIR3128,NFE2L2
SE_00_000700299 chr2:177210509-177219363 Sample_00_0007 Blood naive thymus-derived CD4-positive,alpha-beta T cell 299 2 296 1 0 93 428 HNRNPA3,MIR3128,NFE2L2
SE_02_143200576 chr2:177210528-177213879 Sample_02_1432 Bone A673 STAG2 WT 576 1 110 0 0 53 155 HNRNPA3,MIR4444-2,MIR3128,MIR4444-1
SE_00_004400429 chr2:177210533-177215986 Sample_00_0044 Cord blood T-cell 429 1 193 1 0 75 212 HNRNPA3,MIR3128,NFE2L2
SE_02_093700801 chr2:177210537-177214293 Sample_02_0937 Retinal Pigmented Epithelial RPE190_Con 801 1 130 0 0 54 155 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_02_152901091 chr2:177210554-177214529 Sample_02_1529 Peripheral blood neutrophils_0BC75 1091 1 139 0 0 54 155 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_02_070300570 chr2:177210556-177215470 Sample_02_0703 Pancreas PATU8988S WT 570 1 173 1 0 54 167 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_02_137100732 chr2:177210561-177215618 Sample_02_1371 Pancreas Patu899S-untreated 732 2 183 1 0 59 179 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_01_008400988 chr2:177210570-177214153 Sample_01_0084 Spleen spleen 988 1 123 0 0 54 155 HNRNPA3,MIR3128,NFE2L2
SE_02_138100187 chr2:177210572-177253585 Sample_02_1381 Pancreas Pancreatic cancer cells_DMSO 187 24 1155 30 1 210 1111 NFE2L2,HNRNPA3,MIR4444-2,MIR4444-1,MIR3128
SE_01_003700537 chr2:177210579-177214254 Sample_01_0037 Liver hepatocyte 537 1 130 0 0 54 155 HNRNPA3,MIR3128,NFE2L2
SE_04_000200602 chr2:177210582-177227361 Sample_04_0002 Blood cold shocked K562 602 2 504 14 1 145 783 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_02_129600255 chr2:177210590-177245770 Sample_02_1296 Perigastric lymph node Perigastric lymph node 255 13 939 24 1 201 1111 NFE2L2,HNRNPA3,MIR4444-2,MIR4444-1,MIR3128
SE_01_010101123 chr2:177210597-177213964 Sample_01_0101 Pancreas pancreas_54y 1123 1 113 0 0 53 155 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_02_142800967 chr2:177210597-177214688 Sample_02_1428 Shoulder fibroblast_316 967 1 143 0 0 54 155 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_02_078201091 chr2:177210604-177214247 Sample_02_0782 Blood MEC1 1091 1 130 0 0 54 155 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_02_103300727 chr2:177210621-177216197 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 727 1 196 1 0 81 225 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_02_058400686 chr2:177210622-177223605 Sample_02_0584 Lung H1299 WT 686 4 395 7 1 141 746 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_00_000900170 chr2:177210650-177217735 Sample_00_0009 Blood CD8-positive-alpha-beta-T-cell 170 1 255 1 0 93 341 HNRNPA3,MIR3128,NFE2L2
SE_00_002001622 chr2:177210653-177214542 Sample_00_0020 Large intestine large-intestine_108d 1622 1 140 0 0 54 155 HNRNPA3,MIR3128,NFE2L2
SE_02_058000710 chr2:177210655-177215590 Sample_02_0580 Blood HEL_sgSIK3e4 710 1 182 1 0 57 179 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_00_000500520 chr2:177210662-177214686 Sample_00_0005 Blood B-cell 520 1 143 0 0 54 155 HNRNPA3,MIR3128,NFE2L2
SE_02_155100441 chr2:177210662-177246589 Sample_02_1551 Gastrointestinal Stromal MaMel 441 8 966 24 1 201 1111 NFE2L2,HNRNPA3,MIR4444-2,MIR4444-1,MIR3128
SE_00_002700333 chr2:177210678-177215301 Sample_00_0027 Blood natural-killer-cell 333 1 165 1 0 54 155 HNRNPA3,MIR3128,NFE2L2
SE_00_003601222 chr2:177210681-177214407 Sample_00_0036 Small intestine small-intestine_108days 1222 1 136 0 0 54 155 HNRNPA3,MIR3128,NFE2L2
SE_02_054500579 chr2:177210686-177215356 Sample_02_0545 Bone marrow K562 WT 579 3 165 1 0 54 155 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_00_004700272 chr2:177210690-177216503 Sample_00_0047 Blood effector memory CD4+ alpha-beta T cell 272 4 208 1 0 81 238 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_02_103400515 chr2:177210714-177215248 Sample_02_1034 Blood AML cell 515 1 161 1 0 54 155 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_02_146800613 chr2:177210723-177224309 Sample_02_1468 Blood HUDEP-2_WT 613 4 412 8 1 145 783 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_02_068800197 chr2:177210725-177214784 Sample_02_0688 Lung NCI-H211_no infection 197 1 144 0 0 54 155 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_04_000100980 chr2:177210738-177216065 Sample_04_0001 Blood heat shocked K562 980 1 193 1 0 76 218 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_02_014000385 chr2:177210744-177219341 Sample_02_0140 Kidney RT242 385 1 293 1 0 93 427 HNRNPA3,MIR3128,NFE2L2
SE_00_002500799 chr2:177210783-177214363 Sample_00_0025 Muscle of leg muscle-of-leg 799 1 131 0 0 54 155 HNRNPA3,MIR3128,NFE2L2
SE_02_057500846 chr2:177210796-177214775 Sample_02_0575 Blood MOLM13_sgLKB1e2 846 1 143 0 0 54 155 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_02_061500994 chr2:177210918-177215697 Sample_02_0615 Liposarcoma liposarcoma cells_MLS402 994 2 179 1 0 63 188 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_00_001800392 chr2:177210949-177214600 Sample_00_0018 Dermal fibroblasts iPS-18axian 392 1 130 0 0 54 155 HNRNPA3,MIR3128,NFE2L2
SE_02_057400582 chr2:177210951-177215708 Sample_02_0574 Blood MOLM-13_sgNeg2 582 2 175 1 0 63 188 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_00_002600588 chr2:177210954-177214295 Sample_00_0026 Muscle of trunk muscle-of-trunk 588 1 120 0 0 54 155 HNRNPA3,MIR3128,NFE2L2
SE_02_081900994 chr2:177210954-177215732 Sample_02_0819 Ovary Mucinous ovarian cancer 994 2 178 1 0 63 192 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_02_057600808 chr2:177210977-177216362 Sample_02_0576 Blood HEL_sgLKB1e2 808 3 190 1 0 81 230 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_02_111600583 chr2:177211006-177215735 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 583 1 178 1 0 63 192 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_02_076000785 chr2:177211071-177227189 Sample_02_0760 Ovary BIN-67_SMARCA4 785 2 487 14 1 145 783 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_02_097500187 chr2:177211099-177214829 Sample_02_0975 Brain H3.3K27M-KO_DIPGXIII-c10p5-Rx_R2_cells 187 1 133 0 0 54 155 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_00_000600689 chr2:177211100-177214355 Sample_00_0006 Blood CD14-positive-monocyte 689 1 118 0 0 54 155 HNRNPA3,MIR3128,NFE2L2
SE_02_064500443 chr2:177211113-177215318 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 443 1 150 1 0 54 155 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_00_001000649 chr2:177211201-177214040 Sample_00_0010 Embryo endodermal-cell 649 1 102 0 0 53 155 HNRNPA3,MIR3128,NFE2L2
SE_00_000100149 chr2:177211913-177213242 Sample_00_0001 Adipose adipose-tissue 149 2 45 0 0 44 155 HNRNPA3,MIR3128
SE_02_106100631 chr2:177212623-177243965 Sample_02_1061 Bone TC71_WT 631 8 838 24 1 188 1082 NFE2L2,HNRNPA3,MIR4444-2,MIR4444-1,MIR3128
SE_02_148800634 chr2:177212623-177243965 Sample_02_1488 Bone TC-71 634 8 838 24 1 188 1082 NFE2L2,HNRNPA3,MIR4444-2,MIR4444-1,MIR3128
SE_02_064400573 chr2:177212710-177214805 Sample_02_0644 Tracheobronchial epithelial HTBE_H1N1_12h 573 1 79 0 0 42 102 HNRNPA3,MIR4444-2,MIR4444-1,MIR3128,NFE2L2
SE_01_009300249 chr2:177214154-177296591 Sample_01_0093 Aorta ascending aorta 249 23 2171 173 3 275 1616 NFE2L2,HNRNPA3,MIR3128,LOC100130691,MIR4444-1,MIR6512
SE_02_065900344 chr2:177214255-177262585 Sample_02_0659 Lung H23 344 24 1253 56 1 165 998 NFE2L2,HNRNPA3,MIR3128,MIR4444-1
SE_02_088200486 chr2:177214336-177262483 Sample_02_0882 Ovary SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W 486 8 1249 56 1 165 998 NFE2L2,HNRNPA3,MIR3128,MIR4444-1
SE_02_146200274 chr2:177214357-177266326 Sample_02_1462 Ovary A2780_shMBD3.26 274 13 1331 62 1 200 1434 NFE2L2,HNRNPA3,MIR3128,MIR4444-1,MIR6512
SE_02_151000020 chr2:177214403-177267347 Sample_02_1510 Lung H3122_LR_Pano 20 21 1352 63 1 215 1434 NFE2L2,HNRNPA3,MIR3128,MIR4444-1,MIR6512
SE_02_105600115 chr2:177214516-177276064 Sample_02_1056 Esophagus ChTRT 115 9 1568 85 1 232 1434 NFE2L2,HNRNPA3,MIR3128,MIR4444-1,MIR6512
SE_02_057800374 chr2:177214626-177266159 Sample_02_0578 Blood MOLM-13_sgSIK3e4 374 12 1320 62 1 197 1434 NFE2L2,HNRNPA3,MIR3128,MIR4444-1,MIR6512
SE_02_046600326 chr2:177214686-177276907 Sample_02_0466 Adipose visceral adipocytes 326 32 1590 91 1 232 1434 NFE2L2,HNRNPA3,MIR3128,MIR4444-1,MIR6512
SE_02_097300074 chr2:177214772-177295996 Sample_02_0973 Brain H3.3K27M-KO_BT245-c4p6-Rx_R2_cells 74 11 2133 171 3 275 1616 NFE2L2,HNRNPA3,MIR3128,LOC100130691,MIR4444-1,MIR6512
SE_02_137800361 chr2:177214830-177265909 Sample_02_1378 Pancreas Pancreatic_tumor_associated_fibroblasts_CAF08_untreated 361 12 1311 62 1 192 1434 NFE2L2,HNRNPA3,MIR3128,MIR4444-1,MIR6512
SE_02_145400078 chr2:177214856-177276179 Sample_02_1454 Arter pulmonary arterial smooth muscle cells_PAH1_sialdh1a3 78 13 1561 86 1 232 1434 NFE2L2,HNRNPA3,MIR3128,MIR4444-1,MIR6512
SE_02_088100189 chr2:177214861-177267081 Sample_02_0881 Ovary SVOG3e cells_Dox_12h_transduced_V5-FOXL2_WT 189 12 1339 63 1 215 1434 NFE2L2,HNRNPA3,MIR3128,MIR4444-1,MIR6512
SE_02_145500089 chr2:177214973-177276185 Sample_02_1455 Arter pulmonary arterial smooth muscle cells_PAH2_sialdh1a3 89 14 1555 86 1 232 1434 NFE2L2,HNRNPA3,MIR3128,MIR4444-1,MIR6512
SE_02_045200242 chr2:177215551-177265969 Sample_02_0452 Skin hTERT immortalised human skin fibroblasts_Non-tumourigenic 242 10 1276 61 1 191 1413 NFE2L2,HNRNPA3,MIR3128,MIR4444-1,MIR6512
SE_02_099500659 chr2:177217288-177265813 Sample_02_0995 Blood MOLM-13_empty vector 659 13 1219 61 1 153 1273 NFE2L2,HNRNPA3,MIR3128,MIR4444-1,MIR6512
SE_02_141600292 chr2:177219004-177265728 Sample_02_1416 Brain SF9402 292 11 1165 61 1 153 1201 NFE2L2,HNRNPA3,MIR3128,MIR4444-1,MIR6512
SE_02_139100188 chr2:177220537-177296246 Sample_02_1391 Peripheral blood FE-PD_ALK- 188 14 1975 171 3 220 1266 NFE2L2,HNRNPA3,MIR3128,LOC100130691,MIR4444-1,MIR6512
SE_02_042000105 chr2:177222218-177264707 Sample_02_0420 Pectoralis major muscle LHCN-M2_dox_6h 105 9 1093 57 1 101 801 NFE2L2,HNRNPA3,MIR3128
SE_02_127900814 chr2:177223096-177276343 Sample_02_1279 Bone Mesenchymal stem cells 814 8 1340 82 1 145 866 NFE2L2,HNRNPA3,MIR3128,MIR4444-1,MIR6512
Genomic distribution of SEs associated with HNRNPA3
Genome Browser

The strength of the tissue affected by the gene

Expression of HNRNPA3

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)