SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000186998
Gene: EMID1 Gene type: protein_coding
Strand: + External links:
Genomic region: chr22:29205896-29259597 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104600258 chr22:29142141-29266166 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 258 51 3518 346 8 254 3665 KREMEN1,RHBDD3,EMID1,EWSR1,RASL10A,GAS2L1
SE_02_119200530 chr22:29184053-29226585 Sample_02_1192 Brain GBM26 530 8 1154 113 1 124 606 EMID1,EWSR1,RHBDD3
SE_02_138400465 chr22:29187861-29232802 Sample_02_1384 Other induced pluripotent stem cell derived Neuronal progenitor cell 465 11 1253 121 2 112 1043 EMID1,EWSR1,RHBDD3
SE_02_083700126 chr22:29187940-29225867 Sample_02_0837 Bone marrow TEX-Luciferase-Rx_cells 126 9 1028 103 1 102 536 EMID1,EWSR1,RHBDD3
SE_02_043100206 chr22:29189188-29210407 Sample_02_0431 Peripheral blood CD34+HSPC-derived-erythroid-precursors 206 2 569 64 0 57 203 EMID1
SE_04_000100601 chr22:29189681-29207595 Sample_04_0001 Blood heat shocked K562 601 2 481 52 0 30 203 EMID1,RHBDD3,EWSR1
SE_02_001600399 chr22:29191370-29210055 Sample_02_0016 Blood erythroblasts 399 3 495 60 0 57 203 EMID1
SE_02_136300201 chr22:29191736-29209532 Sample_02_1363 Blood Hudep2 201 5 468 58 0 56 203 EMID1
SE_02_109600151 chr22:29191824-29209996 Sample_02_1096 Blood CD34 Erythroid cells_Don003 151 4 476 60 0 57 203 EMID1
SE_02_082200566 chr22:29191869-29208434 Sample_02_0822 Haematopoietic and lymphoid tissue SET-2_insR_DMSO 566 6 437 56 0 41 203 EMID1
SE_02_109500164 chr22:29191949-29209553 Sample_02_1095 Blood CD34 Erythroid cells_Don002 164 2 462 58 0 56 203 EMID1
SE_02_033600534 chr22:29192008-29209718 Sample_02_0336 Haematopoietic and lymphoid tissue SET2 534 2 469 59 0 57 203 EMID1
SE_02_101800198 chr22:29192137-29209220 Sample_02_1018 Erythroblast CD34+ Hematopoietic stem/progenitor cells_12 days 198 7 447 57 0 56 203 EMID1
SE_02_017600183 chr22:29192539-29211369 Sample_02_0176 Peripheral blood LOUCY 183 1 484 61 0 57 203 EMID1
SE_02_058000810 chr22:29192685-29225368 Sample_02_0580 Blood HEL_sgSIK3e4 810 8 875 94 0 101 522 EMID1,EWSR1,RHBDD3
SE_02_057600788 chr22:29192760-29217384 Sample_02_0576 Blood HEL_sgLKB1e2 788 7 626 71 0 80 426 EMID1
SE_02_083600113 chr22:29193045-29226246 Sample_02_0836 Bone marrow TEX-HIST1H3H-WT-Rx_cells 113 6 908 96 1 102 536 EMID1,EWSR1,RHBDD3
SE_02_057900782 chr22:29193172-29217350 Sample_02_0579 Blood HEL_sgNeg2 782 6 618 70 0 80 426 EMID1
SE_02_077502459 chr22:29193322-29229624 Sample_02_0775 Pancreas EndoC-BH1_SE 2459 9 997 99 1 108 647 EMID1,EWSR1,RHBDD3
SE_02_083400172 chr22:29193841-29225941 Sample_02_0834 Bone marrow TEX-HIST1H3F-WT-Rx_cells 172 13 874 92 1 101 536 EMID1,EWSR1,RHBDD3
SE_02_022200518 chr22:29194242-29209250 Sample_02_0222 Blood DU-528 518 2 398 51 0 56 203 EMID1
SE_01_004400175 chr22:29194453-29212087 Sample_01_0044 Haematopoietic and lymphoid tissue Loucy 175 3 461 56 0 57 203 EMID1
SE_02_083500177 chr22:29194550-29226303 Sample_02_0835 Bone marrow TEX-HIST1H3H-K27M-Rx_cells 177 9 878 91 1 102 536 EMID1,EWSR1,RHBDD3
SE_02_082100600 chr22:29194820-29209635 Sample_02_0821 Haematopoietic and lymphoid tissue SET-2_WT_GSK-LSD1 600 4 398 52 0 57 203 EMID1
SE_02_082000350 chr22:29194841-29208892 Sample_02_0820 Haematopoietic and lymphoid tissue SET-2_WT_DMSO 350 3 372 51 0 41 203 EMID1
SE_02_034300491 chr22:29194985-29226158 Sample_02_0343 Bone marrow HSPC_A0 491 6 856 91 1 102 536 EMID1,EWSR1,RHBDD3
SE_02_083300257 chr22:29194992-29225389 Sample_02_0833 Bone marrow TEX-HIST1H3F-K27I-2-Rx_cells 257 5 826 89 0 101 533 EMID1,EWSR1,RHBDD3
SE_02_034400295 chr22:29195152-29219566 Sample_02_0344 Blood CD34 295 5 639 72 0 82 426 EMID1,EWSR1,RHBDD3
SE_02_004800478 chr22:29195205-29221506 Sample_02_0048 Embryo endodermal CyT49_HE 478 4 692 78 0 87 426 EMID1,EWSR1,RHBDD3
SE_02_133100856 chr22:29195309-29225217 Sample_02_1331 Blood Molm13_CTRL 856 6 812 88 0 101 486 EMID1,EWSR1,RHBDD3
SE_02_062200512 chr22:29195330-29220536 Sample_02_0622 Blood EOL1_Naive 512 6 664 75 0 87 426 EMID1,EWSR1,RHBDD3
SE_00_005500613 chr22:29195360-29233564 Sample_00_0055 Spleen spleen 34y 613 14 1075 109 3 108 1134 EMID1,EWSR1,RHBDD3
SE_02_004500293 chr22:29195365-29221493 Sample_02_0045 Embryo endodermal CyT49_ES_D7 293 3 688 78 0 87 426 EMID1,EWSR1,RHBDD3
SE_02_142000413 chr22:29195833-29209508 Sample_02_1420 Brain DIPG007 413 4 360 48 0 55 203 EMID1
SE_02_048400459 chr22:29195936-29208683 Sample_02_0484 Bone marrow HSCe_23y_CD34+,CD38-,Lineage- 459 5 337 47 0 40 203 EMID1
SE_02_142900814 chr22:29198623-29217386 Sample_02_1429 Blood GM12878_WT 814 8 484 51 0 79 426 EMID1,AP1B1,RHBDD3
SE_02_094300219 chr22:29199766-29207330 Sample_02_0943 Brain LNZ308 219 3 204 23 0 27 203 EMID1
SE_00_005100647 chr22:29199948-29233504 Sample_00_0051 Adrenal gland adrenal gland 30y 647 18 955 90 3 107 1120 EMID1,EWSR1,RHBDD3
SE_02_048700361 chr22:29201720-29217109 Sample_02_0487 Bone marrow HSCe_71y_CD34+,CD38-,Lineage- 361 4 398 39 0 78 426 EMID1
SE_02_003901128 chr22:29201808-29221465 Sample_02_0039 Embryo AFG 1128 3 520 52 0 85 426 EMID1,EWSR1,RHBDD3
SE_02_004400115 chr22:29201862-29221520 Sample_02_0044 Embryo endodermal CyT49_ES_D5 115 3 518 52 0 85 426 EMID1,EWSR1,RHBDD3
SE_02_121100888 chr22:29202716-29226462 Sample_02_1211 Brain GBM21 888 7 662 60 1 100 579 EMID1,EWSR1,RHBDD3
SE_02_004900512 chr22:29205311-29221847 Sample_02_0049 Embryo endodermal CyT49_GTtoH 512 2 419 40 0 80 426 EMID1,EWSR1,RHBDD3
SE_02_001900205 chr22:29254180-29269979 Sample_02_0019 Embryo Neural crest cells 205 4 522 31 2 92 1420 EWSR1,EMID1,RHBDD3,GAS2L1,RASL10A
SE_02_143200176 chr22:29254312-29269903 Sample_02_1432 Bone A673 STAG2 WT 176 6 514 31 2 84 1401 RHBDD3,EMID1,EWSR1,RASL10A,GAS2L1
SE_02_143300147 chr22:29255198-29269735 Sample_02_1433 Bone A673 STAG2 null 147 10 476 24 1 81 1322 RHBDD3,EMID1,EWSR1,RASL10A,GAS2L1
SE_02_097901016 chr22:29256820-29271089 Sample_02_0979 Brain JN14-BS1_H3.3K27M 1016 2 461 21 1 74 1248 RHBDD3,EMID1,EWSR1,RASL10A,GAS2L1
SE_02_110600346 chr22:29257769-29270213 Sample_02_1106 Brain NGP 346 5 409 17 1 71 1248 RHBDD3,EMID1,EWSR1,RASL10A,GAS2L1
SE_02_039600935 chr22:29258455-29270041 Sample_02_0396 Skin NHEK-D 935 4 381 15 1 71 1248 EWSR1,EMID1,RHBDD3,GAS2L1,RASL10A
SE_02_051700840 chr22:29258487-29271151 Sample_02_0517 Esophagus TE5 840 5 410 15 1 74 1248 RHBDD3,EMID1,EWSR1,RASL10A,GAS2L1
Genomic distribution of SEs associated with EMID1
Genome Browser

The strength of the tissue affected by the gene

Expression of EMID1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)