Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000235947
Gene: EGOT Gene type: lncRNA
Strand: - External links:
Genomic region: chr3:4749192-4751590 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_125300046 chr3:4655811-4779810 Sample_02_1253 Mammary gland CAMA1 ER+/FGFR1-amplified 46 39 4267 87 22 581 2557 ITPR1,EGOT
SE_02_108700068 chr3:4679417-4786705 Sample_02_1087 Mammary gland T47D_shCtrl_shRING1B_0 68 31 3647 85 23 540 1943 ITPR1,EGOT
SE_02_039400040 chr3:4679427-4786754 Sample_02_0394 Mammary gland T-47D_2 40 16 3647 85 23 541 1943 ITPR1,EGOT
SE_02_080900031 chr3:4679972-4778477 Sample_02_0809 Mammary gland T47D Serum 31 24 3354 79 17 484 1721 ITPR1,EGOT
SE_02_067200087 chr3:4701248-4777767 Sample_02_0672 Endometrium endometrium cancer_DSG 87 27 2564 57 13 385 1144 ITPR1,EGOT
SE_02_138700021 chr3:4702364-4870705 Sample_02_1387 Peripheral blood Mac-1_ALK- 21 40 5436 139 34 847 2240 ITPR1,EGOT,BHLHE40-AS1
SE_02_012600277 chr3:4702419-4781495 Sample_02_0126 Blood Induced-regulatory-T-cells_DMSO 277 12 2651 56 12 410 1214 ITPR1,EGOT
SE_02_139200179 chr3:4702771-4781678 Sample_02_1392 Peripheral blood Mac-2A_ALK- 179 16 2649 56 12 410 1195 ITPR1,EGOT
SE_02_098900201 chr3:4703044-4780945 Sample_02_0989 Kidney kidney cortex_WT 201 18 2616 56 12 407 1173 ITPR1,EGOT
SE_01_010700176 chr3:4703324-4787655 Sample_01_0107 Esophagus esophagus squamous epithelium 176 20 2806 63 22 441 1314 ITPR1,EGOT,BHLHE40,SUMF1
SE_02_090801034 chr3:4703484-4755608 Sample_02_0908 Heart left ventricle_DCM_LV1262 1034 14 1745 30 10 279 807 ITPR1,EGOT
SE_02_087500522 chr3:4704256-4777682 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 522 28 2468 53 11 376 1092 ITPR1,EGOT
SE_02_149200443 chr3:4704341-4777403 Sample_02_1492 Peripheral blood CD34+ derived peripheral blood-derived mast cells 443 22 2453 53 11 374 1077 ITPR1,EGOT
SE_02_023400801 chr3:4707457-4753649 Sample_02_0234 Tonsil Th17 801 8 1543 24 9 261 729 ITPR1,EGOT
SE_02_023200492 chr3:4707649-4781895 Sample_02_0232 Tonsil ILC3 492 11 2493 52 11 389 1084 ITPR1,EGOT
SE_02_119900277 chr3:4708151-4753686 Sample_02_1199 Brain GBM35 277 11 1521 24 9 260 729 ITPR1,EGOT
SE_02_118600294 chr3:4709979-4754989 Sample_02_1186 Brain GBM15 294 13 1492 23 8 254 729 ITPR1,EGOT
SE_02_146400036 chr3:4710225-4783297 Sample_02_1464 Ovary CAOV4 36 18 2430 52 10 398 1157 ITPR1,EGOT
SE_02_109200190 chr3:4710237-4786654 Sample_02_1092 Mammary gland T47D_shCtrl_24hr 190 17 2535 56 15 409 1223 ITPR1,EGOT
SE_02_109300175 chr3:4710239-4787163 Sample_02_1093 Mammary gland T47D_shCtrl_shRING1B_24hr 175 23 2553 57 18 412 1223 ITPR1,EGOT
SE_02_123400058 chr3:4710265-4786895 Sample_02_1234 Mammary gland T47D_Full 58 24 2542 56 15 412 1221 ITPR1,EGOT
SE_02_120500428 chr3:4710346-4758126 Sample_02_1205 Brain NB3 428 22 1573 29 8 261 701 ITPR1,EGOT
SE_02_067100085 chr3:4710640-4778106 Sample_02_0671 Mammary gland breast cancer_DSG 85 21 2259 50 10 345 953 ITPR1,EGOT
SE_02_157900153 chr3:4710929-4761082 Sample_02_1579 Renal 786-M1A 153 9 1681 34 9 263 667 ITPR1,EGOT
SE_01_008700165 chr3:4711038-4773340 Sample_01_0087 Thyroid gland thyroid-gland 165 12 2113 48 10 308 825 ITPR1,EGOT
SE_02_093600127 chr3:4711159-4753606 Sample_02_0936 Retinal Pigmented Epithelial RPE188_TnT 127 21 1417 23 8 241 667 ITPR1,EGOT
SE_01_007200255 chr3:4711235-4782875 Sample_01_0072 Breast epithelium breast-epithelium 255 14 2396 51 10 371 1096 ITPR1,EGOT
SE_02_032600767 chr3:4711248-4763285 Sample_02_0326 Liver hepatocytes_d3 767 7 1756 39 9 263 667 ITPR1,EGOT
SE_02_032700923 chr3:4711293-4750176 Sample_02_0327 Liver hepatocytes_d6 923 6 1290 23 5 189 448 ITPR1,EGOT
SE_02_126500266 chr3:4711503-4755139 Sample_02_1265 Bone Im-GCT-4072_G34W-repair_WT_D6 266 8 1454 23 8 242 667 ITPR1,EGOT
SE_02_025700192 chr3:4711566-4777581 Sample_02_0257 Endometrioid endometrioid_adenocarcinoma_TumorA 192 12 2215 49 10 338 951 ITPR1,EGOT
SE_02_035400753 chr3:4711579-4760371 Sample_02_0354 Colon Colo205 753 12 1636 33 9 258 665 ITPR1,EGOT
SE_02_093800176 chr3:4711599-4753238 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 176 11 1394 23 8 235 663 ITPR1,EGOT
SE_02_053300460 chr3:4711626-4755503 Sample_02_0533 Blood vessel Circle of Willis_54y 460 20 1459 25 8 241 661 ITPR1,EGOT
SE_00_001100241 chr3:4711638-4756599 Sample_00_0011 Esophagus esophagus 241 9 1487 26 8 243 660 ITPR1,EGOT
SE_02_078400761 chr3:4711650-4755912 Sample_02_0784 Blood OSU-CLL 761 5 1471 25 8 241 659 ITPR1,EGOT
SE_02_045600208 chr3:4711689-4779374 Sample_02_0456 Th17 lymphocytes Th17-IL-10- Day 0 208 20 2250 50 10 339 947 ITPR1,EGOT
SE_02_061200500 chr3:4711690-4753779 Sample_02_0612 Liposarcoma DDLPS_T2 500 12 1401 23 8 233 659 ITPR1,EGOT
SE_02_067400076 chr3:4711720-4777702 Sample_02_0674 Endometrium E1_FA 76 26 2206 49 10 335 942 ITPR1,EGOT
SE_02_053400229 chr3:4711780-4755301 Sample_02_0534 Blood vessel Circle of Willis_60y 229 16 1441 24 8 237 650 ITPR1,EGOT
SE_02_021800056 chr3:4714437-4753732 Sample_02_0218 Mammary gland MCF-7_PMA 56 10 1296 22 8 218 621 ITPR1,EGOT
SE_02_134500185 chr3:4714877-4777669 Sample_02_1345 Leukophereses leukophereses_p358 185 19 2089 47 10 318 906 ITPR1,EGOT
SE_02_088901487 chr3:4716367-4755673 Sample_02_0889 Heart left ventricle_LV1183 1487 15 1299 22 8 219 621 ITPR1,EGOT
SE_02_019300057 chr3:4716413-4773524 Sample_02_0193 Kidney Patient_x750N 57 8 1929 45 10 281 779 ITPR1,EGOT
SE_02_019400159 chr3:4716442-4753692 Sample_02_0194 Kidney Patient_x750T 159 6 1237 20 8 214 621 ITPR1,EGOT
SE_02_093700431 chr3:4716654-4753343 Sample_02_0937 Retinal Pigmented Epithelial RPE190_Con 431 8 1223 19 8 213 621 ITPR1,EGOT
SE_02_061300483 chr3:4716708-4753709 Sample_02_0613 Liposarcoma MLPS_T1 483 18 1229 19 8 214 621 ITPR1,EGOT
SE_02_089001037 chr3:4716816-4754894 Sample_02_0890 Heart left ventricle_LV1200 1037 11 1261 19 8 216 621 ITPR1,EGOT
SE_02_089600914 chr3:4716936-4777685 Sample_02_0896 Heart left ventricle_LV1294 914 20 2029 45 10 315 906 ITPR1,EGOT
SE_02_089800810 chr3:4717050-4777024 Sample_02_0898 Heart left ventricle_LV1356 810 19 2010 45 10 292 863 ITPR1,EGOT
SE_01_010100235 chr3:4718138-4777788 Sample_01_0101 Pancreas pancreas_54y 235 16 1981 46 10 307 859 ITPR1,EGOT
SE_01_008200838 chr3:4718203-4757902 Sample_01_0082 Right lobe of liver right-lobe-of-liver 838 7 1298 25 8 217 574 ITPR1,EGOT
SE_02_128000604 chr3:4718852-4753635 Sample_02_1280 Bone Mesenchymal stem cells_SPC_mutation_ EF1 604 10 1151 19 8 205 574 ITPR1,EGOT
SE_01_010500295 chr3:4718926-4754668 Sample_01_0105 Thyroid gland thyroid gland_54y 295 9 1180 19 8 208 574 ITPR1,EGOT
SE_02_117400473 chr3:4719208-4752823 Sample_02_1174 Brain GBM02 473 14 1111 19 8 195 574 ITPR1,EGOT
SE_02_009500059 chr3:4719767-4786697 Sample_02_0095 Mammary gland MDA-MB-468 59 8 2213 52 15 351 1081 ITPR1,EGOT
SE_02_012700017 chr3:4720013-4870864 Sample_02_0127 Blood Induced-regulatory-T-cells_CPI-703 17 23 4845 130 32 755 1955 ITPR1,EGOT
SE_02_141000873 chr3:4720325-4755213 Sample_02_1410 Brain GSC6 873 6 1149 20 8 193 574 ITPR1,EGOT
SE_02_033400273 chr3:4721002-4779826 Sample_02_0334 Haematopoietic and lymphoid tissue MOLM14_CA25_11 273 6 1948 46 10 294 928 ITPR1,EGOT
SE_02_047500225 chr3:4721301-4753173 Sample_02_0475 Induced hepatocyte-like cells hepatocyte-like cells 225 7 1045 18 8 179 574 ITPR1,EGOT
SE_02_045700373 chr3:4721378-4754412 Sample_02_0457 Th17 lymphocytes Th17-IL-10- Day 5 373 10 1084 18 8 182 574 ITPR1,EGOT
SE_02_098700071 chr3:4721380-4760291 Sample_02_0987 Blood K562_Control_1 71 11 1285 28 9 201 574 ITPR1,EGOT
SE_02_109900095 chr3:4721458-4777433 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 95 23 1855 44 10 280 845 ITPR1,EGOT
SE_02_014400140 chr3:4721506-4763255 Sample_02_0144 Peripheral blood MV411_DMSO 140 3 1392 34 9 202 574 ITPR1,EGOT
SE_02_134100131 chr3:4722032-4778274 Sample_02_1341 Blood MV411 131 16 1866 44 10 284 859 ITPR1,EGOT
SE_02_098800087 chr3:4722037-4760359 Sample_02_0988 Blood K562_EPZ 87 12 1269 27 9 202 574 ITPR1,EGOT
SE_02_133000501 chr3:4722683-4771328 Sample_02_1330 Blood AMU-AML1 501 13 1650 40 10 240 732 ITPR1,EGOT
SE_02_010000446 chr3:4722752-4771527 Sample_02_0100 Peripheral blood Macrophages_GM-CSF_72h 446 5 1659 40 10 241 732 ITPR1,EGOT
SE_02_034300225 chr3:4723845-4777763 Sample_02_0343 Bone marrow HSPC_A0 225 8 1792 41 10 281 859 ITPR1,EGOT
SE_02_024200563 chr3:4734473-4789479 Sample_02_0242 Colon V481 563 5 1816 42 21 304 985 ITPR1,EGOT
SE_02_081900792 chr3:4734682-4758747 Sample_02_0819 Ovary Mucinous ovarian cancer 792 7 795 13 7 139 431 ITPR1,EGOT
SE_02_090400687 chr3:4735370-4780836 Sample_02_0904 Heart left ventricle_DCM_LV1028 687 13 1536 32 8 240 732 ITPR1,EGOT
SE_02_034200366 chr3:4736047-4760395 Sample_02_0342 Liver HSPCs_F0 366 6 841 15 6 138 360 ITPR1,EGOT
SE_02_025600275 chr3:4736153-4777792 Sample_02_0256 Peripheral blood MV411 275 6 1425 32 7 217 645 ITPR1,EGOT
SE_02_083300754 chr3:4736258-4773263 Sample_02_0833 Bone marrow TEX-HIST1H3F-K27I-2-Rx_cells 754 9 1294 30 7 182 518 ITPR1,EGOT
SE_02_091500936 chr3:4736291-4755354 Sample_02_0915 Heart left ventricle_DCM_LV1371 936 7 655 6 5 120 360 ITPR1,EGOT
SE_02_088800984 chr3:4736295-4773647 Sample_02_0888 Heart left ventricle_LV1160 984 15 1299 30 7 182 518 ITPR1,EGOT
SE_02_133200512 chr3:4736379-4777461 Sample_02_1332 Blood Monomac6_CTRL 512 15 1401 31 7 215 635 ITPR1,EGOT
SE_02_025500241 chr3:4737015-4762803 Sample_02_0255 Haematopoietic and lymphoid tissue MOLM13 241 8 899 21 6 136 360 ITPR1,EGOT
SE_02_033700195 chr3:4737113-4762875 Sample_02_0337 Haematopoietic and lymphoid tissue MV411_untreat 195 4 899 21 6 136 360 ITPR1,EGOT
SE_02_062200439 chr3:4737380-4761573 Sample_02_0622 Blood EOL1_Naive 439 15 838 15 6 136 360 ITPR1,EGOT
SE_02_000900299 chr3:4737712-4756907 Sample_02_0009 Kidney 786-O_wtVHL 299 6 648 7 5 122 360 ITPR1,EGOT
SE_02_058100418 chr3:4737827-4762535 Sample_02_0581 Blood MOLM13_empty_HG 418 10 866 19 6 136 360 ITPR1,EGOT
SE_02_046100423 chr3:4737988-4761992 Sample_02_0461 Blood MV-4-11-B cells 423 4 834 14 6 135 360 ITPR1,EGOT
SE_02_058200314 chr3:4738174-4762738 Sample_02_0582 Blood MOLM13_SIK3TQ_HG 314 10 854 19 6 135 360 ITPR1,EGOT
SE_02_057700599 chr3:4738293-4762444 Sample_02_0577 Blood MOLM13_empty 599 8 842 18 6 135 360 ITPR1,EGOT
SE_02_146000816 chr3:4738294-4760313 Sample_02_1460 Blood Mutz-3 816 4 756 13 6 135 360 ITPR1,EGOT
SE_02_099400231 chr3:4738327-4778046 Sample_02_0994 Blood MOLM13_SIK3TQ 231 17 1353 30 7 217 645 ITPR1,EGOT
SE_02_099300233 chr3:4738353-4778380 Sample_02_0993 Blood MOLM-13_empty 233 16 1359 30 7 219 645 ITPR1,EGOT
SE_02_146500079 chr3:4738369-4793981 Sample_02_1465 Ovary CAOV4cis 79 18 1833 38 22 298 914 ITPR1,EGOT
SE_02_133100666 chr3:4738379-4777650 Sample_02_1331 Blood Molm13_CTRL 666 9 1338 29 7 215 645 ITPR1,EGOT
SE_02_008200181 chr3:4738491-4753715 Sample_02_0082 Oral cavity KB_IL-1alpha 181 2 525 2 5 113 360 ITPR1,EGOT
SE_02_099500351 chr3:4738602-4762703 Sample_02_0995 Blood MOLM-13_empty vector 351 10 842 18 6 135 360 ITPR1,EGOT
SE_02_158100446 chr3:4738721-4760411 Sample_02_1581 Renal OS-LM1 446 12 745 12 6 133 360 ITPR1,EGOT
SE_02_134700473 chr3:4738736-4760187 Sample_02_1347 Leukophereses leukophereses_p401 473 8 739 11 6 129 360 ITPR1,EGOT
SE_02_081601795 chr3:4738824-4757677 Sample_02_0816 Ovary Clear cell ovarian cancer 1795 5 633 6 5 120 360 ITPR1,EGOT
SE_02_091801003 chr3:4738937-4756008 Sample_02_0918 Heart left ventricle_DCM_LV1437 1003 6 577 4 5 115 360 ITPR1,EGOT
SE_02_127300812 chr3:4739127-4757786 Sample_02_1273 Cervix HeLa 812 7 622 7 5 119 360 ITPR1,EGOT
SE_02_026800410 chr3:4739451-4755707 Sample_02_0268 Kidney A-498 410 8 543 3 5 106 360 ITPR1,EGOT
SE_00_000301061 chr3:4739561-4773090 Sample_00_0003 Adrenal gland adrenal-gland_97d 1061 4 1159 26 7 168 518 ITPR1,EGOT
SE_02_026700366 chr3:4739711-4760700 Sample_02_0267 Kidney 786-O 366 7 710 11 5 123 360 ITPR1,EGOT
SE_02_001000287 chr3:4739712-4755709 Sample_02_0010 Kidney A-498_emptyvector 287 3 536 3 4 106 360 ITPR1,EGOT
SE_02_027000322 chr3:4739737-4757110 Sample_02_0270 Kidney PCS-400 322 5 572 5 4 110 360 ITPR1,EGOT
SE_02_020500420 chr3:4739742-4757129 Sample_02_0205 Stomach Gastric_Primary_Sample_T 420 4 572 5 4 111 360 ITPR1,EGOT
SE_02_124600381 chr3:4739794-4772830 Sample_02_1246 Brain LAN5_ATRA 381 12 1147 25 6 168 518 ITPR1,EGOT
SE_02_158200306 chr3:4739841-4760116 Sample_02_1582 Renal OS-RC-2 306 10 693 10 5 121 360 ITPR1,EGOT
SE_02_046300428 chr3:4739870-4760722 Sample_02_0463 Blood OCI-AML3 cells 428 11 709 11 5 123 360 ITPR1,EGOT
SE_02_158000471 chr3:4740112-4772759 Sample_02_1580 Renal 786-O 471 9 1142 25 6 168 518 ITPR1,EGOT
SE_01_006600376 chr3:4740213-4753501 Sample_01_0066 Smooth muscle smooth-muscle-cell 376 2 461 1 4 100 360 ITPR1,EGOT
SE_02_034600085 chr3:4740279-4774008 Sample_02_0346 Blood AML10 85 4 1167 26 6 168 518 ITPR1,EGOT
SE_02_001200293 chr3:4740403-4760292 Sample_02_0012 Kidney 786-O_non-targeting 293 9 689 11 5 122 360 ITPR1,EGOT
SE_00_002900769 chr3:4740420-4753360 Sample_00_0029 Ovary ovary 769 7 455 1 4 100 360 ITPR1,EGOT
SE_00_005100715 chr3:4740569-4773300 Sample_00_0051 Adrenal gland adrenal gland 30y 715 14 1149 26 6 168 518 ITPR1,EGOT
SE_02_028600690 chr3:4740643-4754153 Sample_02_0286 Liver HuH7_IL-1alpha_1h 690 2 474 1 4 103 360 ITPR1,EGOT
SE_02_041500243 chr3:4740940-4757403 Sample_02_0415 Stomach YCC22 243 5 549 5 4 111 360 ITPR1,EGOT
SE_00_002300835 chr3:4741204-4753687 Sample_00_0023 Embryo mesenchymal-stem-cell 835 3 432 1 4 86 360 ITPR1,EGOT
SE_02_108800515 chr3:4741445-4787828 Sample_02_1088 Mammary gland T47D_shCtrl_45min 515 18 1548 36 16 251 873 ITPR1,EGOT
SE_02_053200320 chr3:4744133-4787058 Sample_02_0532 Mammary gland T47D 320 12 1436 34 11 232 867 ITPR1,EGOT
SE_02_142900114 chr3:4747643-4785870 Sample_02_1429 Blood GM12878_WT 114 7 1270 32 9 225 867 ITPR1,EGOT
SE_02_078200470 chr3:4748554-4758395 Sample_02_0782 Blood MEC1 470 2 317 6 3 78 360 ITPR1,EGOT
SE_00_002001583 chr3:4749179-4754258 Sample_00_0020 Large intestine large-intestine_108d 1583 1 176 0 3 57 338 ITPR1,EGOT

Genomic distribution of SEs associated with EGOT

The strength of the tissue affected by the gene


Expression of EGOT