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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000204435
Gene: CSNK2B Gene type: protein_coding
Strand: + External links:
Genomic region: chr6:31665227-31670343 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_003200005 chr6:31614704-31740989 Sample_02_0032 Pancreas pancreatic-islets-M 5 25 2973 333 98 1167 14135 BAT5,LY6G6D,BAT3,SNORA38,BAT2,LY6G6E,AIF1,GPANK1,C6ORF47,LY6G6C,LY6G5C,CSNK2B,CLIC1,C6ORF25,DDAH2,LY6G6F,MSH5,LY6G5B,APOM,LST1,C6ORF26,LTB,LTA,TNF,C6ORF27,NCR3
SE_02_011600186 chr6:31619049-31667375 Sample_02_0116 Mammary gland MDA-MB-231_untreat 186 6 1318 158 57 758 6701 GPANK1,CSNK2B,BAT3,SNORA38,BAT2,APOM,C6ORF47,BAT5,LY6G5B,AIF1,LST1,LY6G5C,LTB,LTA,LY6G6E,TNF,NCR3,LY6G6F,LY6G6D
SE_00_001000111 chr6:31619483-31665913 Sample_00_0010 Embryo endodermal-cell 111 7 1265 152 57 748 6448 GPANK1,CSNK2B,BAT3,SNORA38,BAT2,APOM,C6ORF47,BAT5,LY6G5B,AIF1,LST1,LY6G5C,LTB,LTA,LY6G6E,TNF,NCR3,LY6G6F,LY6G6D
SE_02_001600471 chr6:31637557-31667375 Sample_02_0016 Blood erythroblasts 471 4 756 88 31 382 3981 GPANK1,CSNK2B,BAT3,BAT2,APOM,C6ORF47,BAT5,SNORA38,AIF1,LY6G5C,LY6G5B,LY6G6E,NCR3,LY6G6F,LY6G6D
SE_02_013200261 chr6:31638943-31711920 Sample_02_0132 Lung 1015_CL 261 8 1650 180 53 541 7492 LY6G5C,BAT5,GPANK1,LY6G5B,CSNK2B,BAT3,APOM,LY6G6F,C6ORF47,BAT2,SNORA38,MSH5,AIF1,CLIC1,C6ORF25,LY6G6C,LY6G6E,DDAH2,NCR3,LY6G6D
SE_02_013100707 chr6:31639449-31667283 Sample_02_0131 Lung 1015_PT 707 4 682 75 28 359 3797 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,BAT5,SNORA38,AIF1,LY6G5C,BAT2,LY6G5B,LY6G6E,NCR3,LY6G6F,LY6G6D
SE_02_004700034 chr6:31643649-31740781 Sample_02_0047 Pancreatic endoderm IIDP/donor790 34 13 2129 220 55 666 10096 BAT5,LY6G6D,BAT3,LY6G6E,GPANK1,LY6G6F,LY6G6C,LY6G5C,CSNK2B,CLIC1,C6ORF25,DDAH2,C6ORF47,MSH5,LY6G5B,APOM,BAT2,SNORA38,AIF1,C6ORF26,C6ORF27
SE_00_000800300 chr6:31650362-31667732 Sample_00_0008 Blood CD4-positive-alpha-beta-memory-T-cell 300 4 412 53 13 169 2292 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_00_000900247 chr6:31650571-31667314 Sample_00_0009 Blood CD8-positive-alpha-beta-T-cell 247 4 400 52 13 169 2243 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_00_000700244 chr6:31650632-31681902 Sample_00_0007 Blood naive thymus-derived CD4-positive,alpha-beta T cell 244 4 713 83 25 206 3457 LY6G5C,GPANK1,LY6G5B,CSNK2B,BAT3,APOM,C6ORF47,BAT5,SNORA38,AIF1,C6ORF25,BAT2,LY6G6C,LY6G6E,DDAH2,LY6G6F,LY6G6D
SE_00_004400726 chr6:31650706-31667287 Sample_00_0044 Cord blood T-cell 726 4 398 52 13 169 2238 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_00_003600440 chr6:31650807-31666894 Sample_00_0036 Small intestine small-intestine_108days 440 4 379 50 13 169 2184 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_02_004500095 chr6:31650997-31666630 Sample_02_0045 Embryo endodermal CyT49_ES_D7 95 5 367 47 12 166 2144 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_02_003301141 chr6:31651048-31667193 Sample_02_0033 Pancreas pancreatic-islets-F 1141 3 384 48 12 169 2223 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_00_002000545 chr6:31651050-31666940 Sample_00_0020 Large intestine large-intestine_108d 545 4 379 48 12 169 2185 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_02_004900141 chr6:31651123-31666823 Sample_02_0049 Embryo endodermal CyT49_GTtoH 141 3 373 48 12 166 2175 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_00_000300650 chr6:31651172-31666907 Sample_00_0003 Adrenal gland adrenal-gland_97d 650 3 374 48 12 168 2185 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_00_004300210 chr6:31651183-31667102 Sample_00_0043 Stomach stomach_96d 210 3 380 48 12 168 2210 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_02_011400540 chr6:31651184-31667118 Sample_02_0114 Mammary gland CAL51 540 3 380 48 12 168 2213 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_00_002700366 chr6:31651189-31667073 Sample_00_0027 Blood natural-killer-cell 366 3 379 48 12 168 2205 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_02_004800101 chr6:31651218-31666817 Sample_02_0048 Embryo endodermal CyT49_HE 101 4 371 48 12 166 2175 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_00_000600445 chr6:31651224-31667218 Sample_00_0006 Blood CD14-positive-monocyte 445 4 385 48 12 168 2225 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_00_002500185 chr6:31651242-31666999 Sample_00_0025 Muscle of leg muscle-of-leg 185 3 375 48 12 168 2194 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_00_003900181 chr6:31651272-31667021 Sample_00_0039 Spleen spleen_3y 181 3 372 47 12 168 2194 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_00_001800186 chr6:31651336-31666190 Sample_00_0018 Dermal fibroblasts iPS-18axian 186 2 350 45 12 162 2065 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_02_003900643 chr6:31651340-31666775 Sample_02_0039 Embryo AFG 643 3 359 46 12 166 2171 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_02_006400990 chr6:31651362-31666735 Sample_02_0064 Embryo DN-Early_G1 990 3 359 46 12 165 2156 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_00_004000120 chr6:31651394-31666904 Sample_00_0040 Spleen spleen_30y 120 4 363 46 12 168 2185 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_00_001600071 chr6:31651403-31667075 Sample_00_0016 Foreskin iPS-DF-19.11 76 2 368 46 12 168 2207 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_02_003800982 chr6:31651405-31666845 Sample_02_0038 Embryo DE 982 3 363 46 12 166 2175 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_00_002100816 chr6:31651405-31666875 Sample_00_0021 Lung lung_3y 816 3 363 46 12 166 2180 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_00_004100609 chr6:31651407-31666816 Sample_00_0041 Stomach stomach_3y 609 3 361 46 12 166 2175 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_00_002600188 chr6:31651410-31666928 Sample_00_0026 Muscle of trunk muscle-of-trunk 188 3 366 46 12 168 2185 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_02_001900186 chr6:31651411-31666882 Sample_02_0019 Embryo Neural crest cells 186 4 363 46 12 166 2182 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_00_001100428 chr6:31651413-31666945 Sample_00_0011 Esophagus esophagus 428 3 366 46 12 168 2188 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_00_000500502 chr6:31651415-31666907 Sample_00_0005 Blood B-cell 502 3 362 46 12 168 2185 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_02_004600070 chr6:31651417-31666666 Sample_02_0046 Embryo endodermal CyT49_ES_D10 70 5 357 45 12 165 2148 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_02_004200233 chr6:31651419-31667073 Sample_02_0042 Embryo endodermal CyT49_ES_D0 233 3 367 46 12 168 2205 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_00_001500623 chr6:31651425-31667128 Sample_00_0015 Lung IMR-90 623 3 370 46 12 168 2216 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_02_001800510 chr6:31651427-31666835 Sample_02_0018 Embryo NEC 510 3 362 46 12 166 2175 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_00_004500468 chr6:31651430-31666768 Sample_00_0045 Thymus thymus 468 3 357 45 12 166 2170 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_02_003600689 chr6:31651441-31666671 Sample_02_0036 Embryo H7 689 3 357 45 12 165 2149 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_00_003400466 chr6:31651453-31666898 Sample_00_0034 Right cardiac atrium right-cardiac-atrium 466 3 362 46 12 168 2184 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_02_004400088 chr6:31651454-31665984 Sample_02_0044 Embryo endodermal CyT49_ES_D5 88 5 337 43 12 158 2017 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_00_001900255 chr6:31651459-31666699 Sample_00_0019 Dermal fibroblasts iPS-20b 255 3 357 45 12 165 2153 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_00_002200435 chr6:31651461-31666869 Sample_00_0022 Lung lung_30y 435 3 362 46 12 166 2178 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_00_003800252 chr6:31651461-31666914 Sample_00_0038 Spinal cord spinal-cord_108d 252 3 362 46 12 168 2184 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_00_004200340 chr6:31651472-31666866 Sample_00_0042 Stomach stomach_30y 340 3 361 46 12 166 2176 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_02_001700342 chr6:31651493-31666825 Sample_02_0017 Embryo H9_ESC 342 3 359 46 12 166 2172 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_02_002200382 chr6:31651498-31666783 Sample_02_0022 Blood CD8donorA 382 5 356 45 12 166 2169 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_02_004300386 chr6:31651503-31666540 Sample_02_0043 Embryo endodermal CyT49_ES_D2 386 4 352 45 12 165 2138 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_00_003101257 chr6:31651505-31666862 Sample_00_0031 Placenta placenta 1257 3 360 46 12 166 2172 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_00_003500436 chr6:31651510-31666841 Sample_00_0035 Sigmoid colon sigmoid-colon 436 3 360 46 12 166 2168 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_00_002400884 chr6:31651530-31666792 Sample_00_0024 Embryo mesendoderm 884 3 356 45 12 166 2167 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_00_003200519 chr6:31651572-31666933 Sample_00_0032 Psoas muscle psoas-muscle_30y 519 3 364 46 12 168 2174 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_00_001200602 chr6:31651638-31665927 Sample_00_0012 Embryo H1-hESC 602 4 335 43 12 158 1982 GPANK1,CSNK2B,BAT3,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,SNORA38,LY6G6D,LY6G6E
SE_02_042200480 chr6:31657224-31667771 Sample_02_0422 Lung NCI-H1299_EGFP-NEO_reporter_cells_DACSB 480 1 253 36 8 113 1815 GPANK1,CSNK2B,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,BAT3,SNORA38,LY6G6D,LY6G6E
SE_02_028400615 chr6:31657507-31668002 Sample_02_0284 Pelvis patient 119 615 1 252 37 8 110 1793 GPANK1,CSNK2B,APOM,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,LY6G5C,LY6G5B,BAT3,SNORA38,LY6G6D,LY6G6E
SE_02_032300392 chr6:31658616-31667806 Sample_02_0323 Colon RKO 392 1 228 34 7 100 1561 GPANK1,CSNK2B,C6ORF47,AIF1,BAT5,LY6G6F,BAT2,APOM,LY6G5C,LY6G5B,BAT3,SNORA38,LY6G6D,LY6G6E
SE_01_003900170 chr6:31661597-31667272 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 170 1 159 24 3 63 904 GPANK1,CSNK2B,AIF1,BAT5,LY6G6F,BAT2,APOM,C6ORF47,LY6G5C,LY6G5B,BAT3,SNORA38,LY6G6D,LY6G6E
SE_02_018200844 chr6:31662016-31666906 Sample_02_0182 melanoma LOX-IMVI 844 1 133 22 2 61 779 GPANK1,CSNK2B,AIF1,BAT5,LY6G6F,BAT2,APOM,C6ORF47,LY6G5C,LY6G5B,BAT3,SNORA38,LY6G6D,LY6G6E
SE_02_012800564 chr6:31662132-31667331 Sample_02_0128 Haematopoietic and lymphoid tissue ALL-SIL 564 1 146 21 2 61 829 GPANK1,CSNK2B,AIF1,BAT5,LY6G6F,BAT2,APOM,C6ORF47,LY6G5C,LY6G5B,BAT3,SNORA38,LY6G6D,LY6G6E
SE_02_142400405 chr6_GL000256v2_alt:2950727-2966271 Sample_02_1424 Haematopoietic and lymphoid tissue bone marrow K562_Triptolide_4h 405 8 0 0 0 0 0 BAG6,GPANK1,APOM,CSNK2B,C6ORF47
Genomic distribution of SEs associated with CSNK2B
Genome Browser

The strength of the tissue affected by the gene

Expression of CSNK2B

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)