SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900170
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr6:31661597-31667272
Size: 5675
Super-enhancer rank 170
Number of SE elements: 1
ChIP density(Case|Control): 45765.47|2322.21
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GPANK1 ;
ROSE Overlap GPANK1 ; CSNK2B ;
ROSE Proximal AIF1 ; BAT5 ; LY6G6F ; BAT2 ; APOM ; C6orf47 ; LY6G5C ; GPANK1 ; LY6G5B ; BAT3 ; SNORA38 ; LY6G6D ; LY6G6E ;
ROSE Closest GPANK1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA C6orf25 ; LTB ; LST1 ; LY6G5B ; ABHD16A ; CLIC1 ; BAG6 ; DDAH2 ; APOM ; GPANK1 ; LTA ; NCR3 ; LY6G6C ; AIF1 ; TNF ; MSH5 ; LY6G6E ; MIR4646 ; CSNK2B ; SNORA38 ; PRRC2A ; LY6G6F ; MSH5-SAPCD1 ; MIR6832 ; LY6G6D ; LY6G5C ; SAPCD1 ; C6orf47 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900170 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers