SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000165084
Gene: C8ORF34 Gene type: protein_coding
Strand: + External links:
Genomic region: chr8:68330955-68819023 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_082500013 chr8:68564979-69121797 Sample_02_0825 Stomach SNU484 13 143 15510 222 40 901 580 C8ORF34,LINC01592
SE_02_063000251 chr8:68576145-68587405 Sample_02_0630 Gastrointestinal Stromal GIST-T1_Imatinib 251 3 292 1 0 26 0 C8ORF34,C8ORF34-AS1
SE_02_127900919 chr8:68576184-68588871 Sample_02_1279 Bone Mesenchymal stem cells 919 1 328 2 0 26 0 C8ORF34,C8ORF34-AS1
SE_02_060601056 chr8:68576416-68587899 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 1056 6 299 1 0 25 0 C8ORF34,C8ORF34-AS1
SE_02_026300761 chr8:68576823-68588966 Sample_02_0263 Osteoblastic hFOB_undifferentiated 761 2 317 2 0 22 0 C8ORF34,CPA6
SE_02_060501027 chr8:68577000-68588272 Sample_02_0605 Skin Skin Fibroblast_DMSO 1027 4 292 1 0 22 0 C8ORF34,C8ORF34-AS1,LINC01592
SE_02_063100199 chr8:68577019-68588561 Sample_02_0631 Gastrointestinal Stromal GIST-T1_JQ1 199 3 299 2 0 22 0 C8ORF34,C8ORF34-AS1,LINC01592
SE_02_062900444 chr8:68577770-68587494 Sample_02_0629 Gastrointestinal Stromal GIST-T1_DMSO 444 2 254 1 0 21 0 C8ORF34,C8ORF34-AS1
SE_02_154500144 chr8:68577896-68597423 Sample_02_1545 Gastrointestinal Stromal GIST-T1/816 144 5 501 2 1 27 0 C8ORF34,C8ORF34-AS1,LINC01592
SE_02_154200407 chr8:68577913-68587222 Sample_02_1542 Gastrointestinal Stromal GIST-T1 407 2 242 1 0 18 0 C8ORF34,C8ORF34-AS1,LINC01592
SE_02_075201278 chr8:68608532-68626147 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 1278 3 499 1 3 14 0 C8ORF34,C8ORF34-AS1
SE_02_075500534 chr8:68608685-68647910 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 534 6 1066 3 5 70 41 C8ORF34,C8ORF34-AS1
SE_02_075900171 chr8:68619012-68650135 Sample_02_0759 Ovary BIN-67_Control 171 18 811 4 5 77 41 C8ORF34,C8ORF34-AS1
SE_02_076100240 chr8:68620173-68650134 Sample_02_0761 Ovary BIN-67_SMARCA4.T910M 240 12 783 4 5 77 41 C8ORF34,C8ORF34-AS1
SE_02_156600424 chr8:68621073-68631009 Sample_02_1566 Dermal Dermal fibroblast 424 2 257 1 4 42 0 C8ORF34,C8ORF34-AS1
SE_02_026100773 chr8:68621178-68631165 Sample_02_0261 Osteoblastic hFOB_differentiated 773 1 257 1 4 42 0 C8ORF34
SE_02_060500682 chr8:68621262-68641386 Sample_02_0605 Skin Skin Fibroblast_DMSO 682 4 515 1 4 61 41 C8ORF34,C8ORF34-AS1,LINC01592
SE_02_060600726 chr8:68621753-68631324 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 726 2 242 1 4 37 0 C8ORF34,C8ORF34-AS1
SE_02_076000521 chr8:68621788-68631827 Sample_02_0760 Ovary BIN-67_SMARCA4 521 2 247 1 4 37 0 C8ORF34,C8ORF34-AS1
SE_02_157100873 chr8:68622052-68641271 Sample_02_1571 Fibroblast Fibroblast cells 873 3 488 1 4 54 41 C8ORF34,C8ORF34-AS1,LINC01592
SE_01_006300495 chr8:68623273-68629938 Sample_01_0063 Skeletal muscle skeletal-muscle-myoblast 495 1 174 1 2 37 0 C8ORF34
SE_02_053200310 chr8:68686870-68714710 Sample_02_0532 Mammary gland T47D 310 4 745 6 0 40 65 C8ORF34,C8ORF34-AS1
SE_02_039400022 chr8:68690328-68779080 Sample_02_0394 Mammary gland T-47D_2 22 18 2428 8 4 168 125 C8ORF34,SULF1
SE_02_080900365 chr8:68690941-68709298 Sample_02_0809 Mammary gland T47D Serum 365 10 476 3 0 38 65 C8ORF34,C8ORF34-AS1
SE_02_108800572 chr8:68697376-68702568 Sample_02_1088 Mammary gland T47D_shCtrl_45min 572 1 137 1 0 1 0 C8ORF34,C8ORF34-AS1
SE_02_093700417 chr8:68697442-68734316 Sample_02_0937 Retinal Pigmented Epithelial RPE190_Con 417 15 958 4 3 67 59 C8ORF34,C8ORF34-AS1
SE_02_086800112 chr8:68706729-68771403 Sample_02_0868 Bone marrow Bone marrow derived hMSC_d10 112 33 1748 3 4 122 59 C8ORF34,LINC01592
SE_02_127900022 chr8:68711079-68799414 Sample_02_1279 Bone Mesenchymal stem cells 22 12 2472 8 5 166 80 C8ORF34,LINC01592
SE_02_131100491 chr8:68711282-68737973 Sample_02_1311 Bone marrow HDMSCs 491 3 687 2 3 37 23 C8ORF34,LINC01592
SE_02_086700116 chr8:68711432-68800064 Sample_02_0867 Bone marrow Bone marrow derived hMSC_d0 116 57 2477 8 5 166 80 C8ORF34,LINC01592
SE_02_151500271 chr8:68722730-68739142 Sample_02_1515 Non-transformed mammary epithelial IMEC WT 271 7 434 1 2 22 0 C8ORF34,LINC01592
SE_02_017201264 chr8:68722822-68773192 Sample_02_0172 Lung IMR-90_quiescent 1264 6 1404 2 3 99 0 C8ORF34,SULF1
SE_02_026300061 chr8:68722905-68773644 Sample_02_0263 Osteoblastic hFOB_undifferentiated 61 5 1418 2 3 99 0 C8ORF34,SULF1
SE_02_026100135 chr8:68723041-68773466 Sample_02_0261 Osteoblastic hFOB_differentiated 135 6 1412 2 3 99 0 C8ORF34
SE_02_126701583 chr8:68723164-68736080 Sample_02_1267 Bone Im-GCT-4072_G34W 1583 6 340 1 2 21 0 C8ORF34,LINC01592
SE_02_049900279 chr8:68723315-68773085 Sample_02_0499 Fetal lung IMR90 IR Senescence 279 17 1391 2 3 98 0 C8ORF34,LINC01592
SE_02_011000464 chr8:68723316-68792198 Sample_02_0110 Ovaries IOE11 464 8 1951 6 4 145 57 C8ORF34,SULF1
SE_02_126301623 chr8:68723387-68737569 Sample_02_1263 Bone Im-GCT-4072_G34W unedited 1623 6 374 1 2 21 0 C8ORF34,LINC01592
SE_02_156600218 chr8:68723406-68772547 Sample_02_1566 Dermal Dermal fibroblast 218 10 1369 2 3 94 0 C8ORF34,LINC01592
SE_02_060500151 chr8:68723583-68773150 Sample_02_0605 Skin Skin Fibroblast_DMSO 151 13 1387 2 3 98 0 C8ORF34,LINC01592
SE_02_026200233 chr8:68723596-68772366 Sample_02_0262 Osteoblastic hFOB_JQ1_differentiated 233 6 1362 2 3 93 0 C8ORF34
SE_02_047400370 chr8:68723599-68772471 Sample_02_0474 Fibroblast umbilical cord Fibroblast 370 13 1365 2 3 94 0 C8ORF34,LINC01592
SE_02_041900925 chr8:68723650-68736274 Sample_02_0419 Pectoralis major muscle LHCN-M2_nodox 925 5 335 1 2 20 0 C8ORF34,SULF1
SE_02_088601743 chr8:68723820-68737218 Sample_02_0886 Skin foreskin_ p63KLF4 1743 3 351 1 2 21 0 C8ORF34,LINC01592
SE_02_135500455 chr8:68723878-68738147 Sample_02_1355 Umbilical cord umbilical cord-derived mesenchymal stem cells_old 455 2 381 1 2 21 0 C8ORF34,LINC01592
SE_02_060600659 chr8:68723908-68738313 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 659 4 385 1 2 21 0 C8ORF34,LINC01592
SE_02_157100929 chr8:68724360-68737641 Sample_02_1571 Fibroblast Fibroblast cells 929 6 361 1 2 20 0 C8ORF34,LINC01592
SE_02_137601135 chr8:68724472-68737731 Sample_02_1376 Pancreas Pancreatic_tumor_associated_fibroblasts_B011C_untreated 1135 10 360 1 1 20 0 C8ORF34,LINC01592,C8ORF34-AS1
SE_02_009100664 chr8:68728848-68736397 Sample_02_0091 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_Control_cycle_0 664 3 198 1 0 17 0 C8ORF34
SE_02_080900123 chr8:68729144-68777385 Sample_02_0809 Mammary gland T47D Serum 123 10 1386 4 1 105 37 C8ORF34,LINC01592
SE_02_053200105 chr8:68729296-68772575 Sample_02_0532 Mammary gland T47D 105 23 1219 2 1 90 0 C8ORF34,LINC01592
SE_02_141300204 chr8:68748761-68787472 Sample_02_1413 Muscle RH4_sgBRG1 204 13 1136 4 1 104 44 C8ORF34,LINC01592
SE_02_041000319 chr8:68749244-68775157 Sample_02_0410 Brain BT16_NoDox 319 2 759 2 1 79 0 C8ORF34
SE_02_040700392 chr8:68749273-68774947 Sample_02_0407 Brain BT16 392 3 753 2 1 79 0 C8ORF34
SE_02_075900124 chr8:68750332-68777584 Sample_02_0759 Ovary BIN-67_Control 124 2 814 3 1 87 37 C8ORF34,LINC01592
SE_02_084001227 chr8:68750600-68761858 Sample_02_0840 Embryo hNPCs_R1159Q/+ 1227 4 301 0 1 37 0 C8ORF34,LINC01592
SE_02_135500840 chr8:68750690-68772531 Sample_02_1355 Umbilical cord umbilical cord-derived mesenchymal stem cells_old 840 5 628 1 1 73 0 C8ORF34,LINC01592
SE_02_157100391 chr8:68750694-68772554 Sample_02_1571 Fibroblast Fibroblast cells 391 5 628 1 1 73 0 C8ORF34,LINC01592
SE_02_137600865 chr8:68750765-68773058 Sample_02_1376 Pancreas Pancreatic_tumor_associated_fibroblasts_B011C_untreated 865 23 645 1 1 77 0 C8ORF34,LINC01592,C8ORF34-AS1
SE_02_123400319 chr8:68750815-68774343 Sample_02_1234 Mammary gland T47D_Full 319 8 693 2 1 78 0 C8ORF34,LINC01592
SE_02_060600679 chr8:68750869-68772696 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 679 7 625 1 1 75 0 C8ORF34,LINC01592
SE_02_049800366 chr8:68750871-68772617 Sample_02_0498 Fetal lung IMR90 Senescent_1 366 17 623 1 1 73 0 C8ORF34,LINC01592
SE_02_088601077 chr8:68750887-68772692 Sample_02_0886 Skin foreskin_ p63KLF4 1077 3 625 1 1 75 0 C8ORF34,LINC01592
SE_02_109200566 chr8:68750911-68775010 Sample_02_1092 Mammary gland T47D_shCtrl_24hr 566 10 712 2 1 79 0 C8ORF34,LINC01592
SE_02_109300631 chr8:68750965-68774930 Sample_02_1093 Mammary gland T47D_shCtrl_shRING1B_24hr 631 8 704 2 1 79 0 C8ORF34,LINC01592
SE_02_087600349 chr8:68751004-68793726 Sample_02_0876 Muscle SMS-CTR_CASZ1b_Ctrl 349 26 1256 5 2 124 57 C8ORF34,LINC01592,LINC01603
SE_02_108800342 chr8:68751241-68774926 Sample_02_1088 Mammary gland T47D_shCtrl_45min 342 6 691 2 1 74 0 C8ORF34,LINC01592
SE_02_076100233 chr8:68751394-68776688 Sample_02_0761 Ovary BIN-67_SMARCA4.T910M 233 6 741 3 1 79 37 C8ORF34,LINC01592
SE_02_076900914 chr8:68751512-68768503 Sample_02_0769 Ovary HEYA8 914 12 478 1 1 55 0 C8ORF34,LINC01592
SE_02_146400342 chr8:68751748-68774868 Sample_02_1464 Ovary CAOV4 342 8 673 2 1 68 0 C8ORF34,LINC01592
SE_02_036400558 chr8:68751985-68796475 Sample_02_0364 Skeletal muscle CTR 558 11 1280 5 2 114 57 C8ORF34,SULF1
SE_02_108000842 chr8:68752190-68791497 Sample_02_1080 Muscle JR1 shCtrl 842 18 1133 5 1 113 57 C8ORF34,LINC01592,SULF1
SE_02_137501017 chr8:68752222-68772950 Sample_02_1375 Pancreas Pancreatic_tumor_associated_fibroblasts_B0010A_untreated 1017 18 587 1 1 64 0 C8ORF34,LINC01592,C8ORF34-AS1
SE_02_108600839 chr8:68752226-68774913 Sample_02_1086 Mammary gland T47D_shCtrl_0hr 839 8 662 2 1 68 0 C8ORF34,LINC01592,C8ORF34-AS1
SE_02_109000453 chr8:68752827-68774592 Sample_02_1090 Mammary gland T47D_shCtrl_8hr 453 4 633 2 1 67 0 C8ORF34,LINC01592
SE_02_076000315 chr8:68753401-68774831 Sample_02_0760 Ovary BIN-67_SMARCA4 315 8 630 2 1 68 0 C8ORF34,LINC01592
SE_02_126300882 chr8:68753711-68772769 Sample_02_1263 Bone Im-GCT-4072_G34W unedited 882 4 546 1 1 64 0 C8ORF34,LINC01592
SE_02_126701102 chr8:68758417-68772572 Sample_02_1267 Bone Im-GCT-4072_G34W 1102 6 419 1 0 49 0 C8ORF34,LINC01592
SE_02_012400887 chr8:68790211-68807912 Sample_02_0124 Embryo Embryonic-stem-cells_Naive 887 3 473 4 3 12 0 C8ORF34,SULF1
Genomic distribution of SEs associated with C8ORF34
Genome Browser

The strength of the tissue affected by the gene

Expression of C8ORF34

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)