Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000273294
Gene: C1QTNF3-AMACR Gene type: protein_coding
Strand: - External links:
Genomic region: chr5:33987174-34124528 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_154400144 chr5:33974623-34022655 Sample_02_1544 Gastrointestinal Stromal GIST-882 144 9 1253 131 2 69 1175 C1QTNF3,SLC45A2,C1QTNF3-AMACR,AMACR,RXFP3
SE_02_077600110 chr5:33977760-34010367 Sample_02_0776 Pancreas EndoC-BH1 110 7 835 81 2 52 903 SLC45A2,C1QTNF3-AMACR,AMACR,RXFP3,C1QTNF3
SE_02_129600156 chr5:33987011-34031750 Sample_02_1296 Perigastric lymph node Perigastric lymph node 156 12 1167 151 2 73 1071 C1QTNF3-AMACR,C1QTNF3,AMACR,SLC45A2
SE_02_129700082 chr5:33987391-34059895 Sample_02_1297 Lung lung 82 29 1895 223 4 168 1279 C1QTNF3-AMACR,C1QTNF3,AMACR,SLC45A2
SE_02_066900247 chr5:33990269-34011758 Sample_02_0669 Prostate prostate cancer_DSG 247 10 545 77 2 26 405 C1QTNF3-AMACR,AMACR,C1QTNF3,SLC45A2
SE_02_129900292 chr5:33990464-34014085 Sample_02_1299 Liver liver 292 10 599 83 2 26 405 C1QTNF3-AMACR,AMACR,C1QTNF3,SLC45A2
SE_02_051000399 chr5:33990534-34011015 Sample_02_0510 Prostate LNCaP95_shGFP_DHT 399 4 520 73 2 26 405 C1QTNF3-AMACR,AMACR,C1QTNF3,SLC45A2
SE_02_077500567 chr5:33991884-34008879 Sample_02_0775 Pancreas EndoC-BH1_SE 567 6 433 57 2 26 405 C1QTNF3-AMACR,AMACR,C1QTNF3,SLC45A2
SE_02_129800298 chr5:33991921-34012552 Sample_02_1298 Hilar lymph node Hilar lymph node 298 13 538 74 2 26 405 C1QTNF3-AMACR,AMACR,C1QTNF3,SLC45A2
SE_02_052300045 chr5:33994569-34013882 Sample_02_0523 Lung NCIH810 45 7 504 68 1 26 405 C1QTNF3-AMACR,AMACR,C1QTNF3,SLC45A2
SE_02_088601629 chr5:33997260-34023301 Sample_02_0886 Skin foreskin_ p63KLF4 1629 6 704 94 1 37 638 C1QTNF3-AMACR,C1QTNF3,AMACR,SLC45A2
SE_02_066800127 chr5:33998647-34011030 Sample_02_0668 Prostate prostate cancer FA 127 8 322 46 1 26 291 C1QTNF3-AMACR,AMACR,C1QTNF3,SLC45A2
SE_02_068700681 chr5:33999581-34013289 Sample_02_0687 Lung NCI-H146_no infection 681 3 357 48 1 23 265 C1QTNF3-AMACR,AMACR,C1QTNF3,SLC45A2
SE_02_049500352 chr5:33999957-34010624 Sample_02_0495 Islets differentiated hESCs Early LSD1 inhibition PP2 352 3 277 37 1 23 265 C1QTNF3-AMACR,AMACR,C1QTNF3,SLC45A2
SE_02_049300524 chr5:34000524-34022624 Sample_02_0493 Islets differentiated hESCs Early pancreatic progenitor cells 524 4 588 79 1 34 537 C1QTNF3-AMACR,C1QTNF3,AMACR,SLC45A2
SE_02_158000668 chr5:34000950-34062379 Sample_02_1580 Renal 786-O 668 22 1595 182 3 157 935 C1QTNF3-AMACR,C1QTNF3,AMACR,SLC45A2
SE_02_047701072 chr5:34006480-34035438 Sample_02_0477 Colon intestinal epithelial organoids_139a 1072 11 765 105 0 70 677 C1QTNF3-AMACR,C1QTNF3,AMACR,SLC45A2
SE_02_051100637 chr5:34006676-34011028 Sample_02_0511 Prostate LNCaP95_shARv7_ETOH 637 2 122 16 0 7 176 C1QTNF3-AMACR,AMACR,C1QTNF3,SLC45A2
SE_02_127800735 chr5:34035508-34054035 Sample_02_1278 Chordoma UCH1_DMSO_48h 735 6 472 46 1 64 158 C1QTNF3-AMACR,C1QTNF3,AMACR
SE_02_044600681 chr5:34037437-34061887 Sample_02_0446 Bone osteosarcoma tumor P2 681 11 645 49 2 65 93 C1QTNF3-AMACR,C1QTNF3,AMACR
SE_02_086701242 chr5:34037490-34055224 Sample_02_0867 Bone marrow Bone marrow derived hMSC_d0 1242 15 464 40 1 58 93 C1QTNF3-AMACR,C1QTNF3,AMACR
SE_02_152100335 chr5:34040111-34055126 Sample_02_1521 Skin A375 DMSO 335 4 396 34 1 56 93 C1QTNF3-AMACR,C1QTNF3,AMACR

Genomic distribution of SEs associated with C1QTNF3-AMACR

The strength of the tissue affected by the gene


Expression of C1QTNF3-AMACR