SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID:
Gene: C12ORF80 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_142800261 chr12:52133168-52206754 Sample_02_1428 Shoulder fibroblast_316 261 25 2359 189 2 190 1699 KRT80,C12ORF80,OR7E47P,LINC00592,KRT7
SE_02_086800057 chr12:52137796-52207970 Sample_02_0868 Bone marrow Bone marrow derived hMSC_d10 57 30 2242 178 2 189 1734 KRT80,C12ORF80,OR7E47P,LINC00592,KRT7
SE_02_095100026 chr12:52141238-52206265 Sample_02_0951 HMSCs hMSCs 26 24 2094 162 2 177 1588 KRT80,C12ORF80,OR7E47P,LINC00592,KRT7
SE_02_072300271 chr12:52143118-52207346 Sample_02_0723 Pancreas MIAPaca2 WT 271 15 2069 156 2 187 1722 KRT80,C12ORF80,OR7E47P,LINC00592,KRT7,C12orf80,ATG101,NR4A1
SE_02_088300048 chr12:52143147-52208437 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 48 14 2098 158 2 193 1830 KRT80,C12ORF80,OR7E47P,LINC00592,KRT7
SE_02_101700670 chr12:52143368-52208281 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 670 19 2081 157 2 192 1800 KRT80,C12ORF80,OR7E47P,LINC00592,KRT7
SE_02_050000136 chr12:52143387-52205952 Sample_02_0500 Fetal lung IMR90_#2 136 26 2010 152 2 176 1554 KRT80,C12ORF80,OR7E47P,LINC00592,KRT7
SE_02_056900182 chr12:52143437-52209039 Sample_02_0569 Periodontal ligament mesenchymal stem cell 182 30 2104 159 2 193 1840 KRT80,C12ORF80,OR7E47P,LINC00592,KRT7
SE_02_120100010 chr12:52143485-52209331 Sample_02_1201 Brain GBM37 10 17 2114 159 2 193 1840 KRT80,C12ORF80,OR7E47P,LINC00592,KRT7
SE_02_088000056 chr12:52143609-52206062 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 56 13 2007 152 2 177 1563 KRT80,C12ORF80,LINC00592,KRT7
SE_02_046600968 chr12:52143763-52207206 Sample_02_0466 Adipose visceral adipocytes 968 26 2036 153 2 187 1722 KRT80,C12ORF80,LINC00592,KRT7
SE_02_094300021 chr12:52143842-52207566 Sample_02_0943 Brain LNZ308 21 24 2043 154 2 187 1722 KRT80,C12ORF80,LINC00592,KRT7
SE_02_150200210 chr12:52143977-52207967 Sample_02_1502 Brain SHEP-21N_DOX_24h_NOSPIKE 210 19 2047 152 2 187 1734 KRT80,C12ORF80,LINC00592,KRT7
SE_02_044400389 chr12:52144156-52208085 Sample_02_0444 Bone osteosarcoma tumor P10 389 28 2047 150 2 187 1753 KRT80,C12ORF80,LINC00592,KRT7
SE_02_142600132 chr12:52144320-52208372 Sample_02_1426 Shoulder fibroblast_341 132 19 2058 151 2 191 1818 KRT80,C12ORF80,LINC00592,KRT7
SE_01_011500154 chr12:52144957-52207438 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 154 20 2010 147 2 186 1722 KRT80,C12ORF80,LINC00592,KRT7,NR4A1,C12orf80,GRASP,ATG101
SE_02_044500708 chr12:52145645-52207478 Sample_02_0445 Lung lung metastasis from primary osteosarcoma tumor M10 708 33 1988 147 2 185 1722 KRT80,C12ORF80,LINC00592,KRT7
SE_02_074000509 chr12:52163113-52206257 Sample_02_0740 Muscle RH3 509 14 1389 114 2 146 1586 KRT80,C12ORF80,LINC00592,KRT7
SE_02_141500146 chr12:52163381-52206174 Sample_02_1415 Brain DIPGIV 146 15 1381 114 2 146 1577 KRT80,C12ORF80,LINC00592,KRT7
SE_00_005100622 chr12:52163389-52208293 Sample_00_0051 Adrenal gland adrenal gland 30y 622 17 1441 119 2 161 1802 KRT80,C12ORF80,LINC00592,KRT7
SE_02_105800758 chr12:52170029-52207918 Sample_02_1058 Bone A673_SA2 Rescue 758 15 1223 110 2 150 1544 KRT80,C12ORF80,LINC00592,KRT7
SE_02_123700180 chr12:52174742-52209445 Sample_02_1237 Skin MKL2_virus_positive 180 11 1121 107 1 133 893 KRT80,C12ORF80,LINC00592,KRT7
SE_02_057000338 chr12:52175430-52206890 Sample_02_0570 Brain LN229_10_mM_glucose 338 10 1018 100 1 127 775 KRT80,C12ORF80,LINC00592,KRT7
SE_02_146001181 chr12:52175822-52208065 Sample_02_1460 Blood Mutz-3 1181 11 1040 102 1 128 801 KRT80,C12ORF80,LINC00592,KRT7
SE_02_085800937 chr12:52175911-52207113 Sample_02_0858 Glioblastoma Glioblastoma neurosphere cell_HF-3177 937 4 1017 100 1 127 775 KRT80,C12ORF80,LINC00592,KRT7
SE_02_085300055 chr12:52178219-52208317 Sample_02_0853 Mammary gland MCF7L-TamR 55 1 966 99 1 122 860 KRT80,C12ORF80,LINC00592,KRT7
SE_02_158400155 chr12:52178889-52208298 Sample_02_1584 Brain U87 GBM_Mock 155 6 949 98 1 122 856 KRT80,C12ORF80,LINC00592,KRT7
SE_02_116800071 chr12:52178972-52208420 Sample_02_1168 Biliary H69_TGF Vehicle_2 71 1 953 98 1 122 882 KRT80,C12ORF80,LINC00592,KRT7
SE_02_088200174 chr12:52180962-52208365 Sample_02_0882 Ovary SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W 174 7 903 97 1 119 729 KRT80,C12ORF80,LINC00592,KRT7
SE_02_044000402 chr12:52181028-52207957 Sample_02_0440 Bone LM7 402 15 885 95 1 114 623 KRT80,C12ORF80,LINC00592,KRT7
SE_02_087900313 chr12:52181186-52206744 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 313 7 848 92 1 114 568 KRT80,C12ORF80,LINC00592,KRT7
SE_02_096700682 chr12:52181298-52207980 Sample_02_0967 Brain H3.3K27M_JN57 682 10 875 95 1 115 606 KRT80,C12ORF80,LINC00592,KRT7
SE_02_087800254 chr12:52181397-52206051 Sample_02_0878 Ovary SVOG3e cells_noDox_control 254 6 819 91 1 104 434 KRT80,C12ORF80,LINC00592,KRT7
SE_02_097400348 chr12:52181415-52208524 Sample_02_0974 Brain H3.3K27M-KO_DIPGXIII-C14-nKO-Rx_PARENTAL_cells 348 7 891 96 1 120 707 KRT80,C12ORF80,LINC00592,KRT7
SE_02_088100322 chr12:52181455-52208495 Sample_02_0881 Ovary SVOG3e cells_Dox_12h_transduced_V5-FOXL2_WT 322 7 890 96 1 120 704 KRT80,C12ORF80,LINC00592,KRT7
SE_02_126400878 chr12:52181471-52208458 Sample_02_1264 Bone Im-GCT-4072_G34W KO 878 10 888 96 1 120 702 KRT80,C12ORF80,LINC00592,KRT7
SE_02_059000298 chr12:52181976-52208006 Sample_02_0590 Cervix HeLa Kyoto_Luci PWWP2A siRNA 298 13 850 93 1 114 611 KRT80,C12ORF80,LINC00592,KRT7
SE_02_114900023 chr12:52183752-52207089 Sample_02_1149 Kidney WT 9-12_control_Nrf2_SFN 23 5 785 87 1 110 594 KRT80,C12ORF80,LINC00592,KRT7
SE_02_078000073 chr12:52183752-52218337 Sample_02_0780 Liver SMMC-7721 73 1 1127 128 4 145 1149 KRT80,C12ORF80,LINC00592,KRT7
SE_02_132800572 chr12:52184373-52206504 Sample_02_1328 Non-mineralized aortic valves aortic valve interstitial cells 572 7 747 82 1 105 516 KRT80,C12ORF80,LINC00592,KRT7
SE_02_085200092 chr12:52184977-52210020 Sample_02_0852 Mammary gland MCF7L-P 92 1 843 90 1 117 712 KRT80,C12ORF80,LINC00592,KRT7
SE_02_115900091 chr12:52184977-52210020 Sample_02_1159 Mammary gland MCF7 91 1 843 90 1 117 712 KRT80,C12ORF80,LINC00592,KRT7,C12orf80
SE_02_068200399 chr12:52185805-52207987 Sample_02_0682 Blood Kasumi-1 399 5 736 83 1 103 499 KRT80,C12ORF80,LINC00592,KRT7,NR4A1,C12orf80
SE_02_126601186 chr12:52186075-52208232 Sample_02_1266 Bone Im-GCT-4072_G34W-repair_WT_E3 1186 6 745 84 1 107 515 KRT80,C12ORF80,LINC00592,KRT7
SE_02_114300086 chr12:52186702-52208238 Sample_02_1143 Peripheral nerve MPNST724_PRC2 WT 86 7 729 83 1 107 515 KRT80,C12ORF80,LINC00592,KRT7
SE_02_110700326 chr12:52189607-52208274 Sample_02_1107 Brain SK-N-AS 326 1 648 77 1 97 528 KRT80,C12ORF80,LINC00592,KRT7
SE_02_050100304 chr12:52189638-52208340 Sample_02_0501 Blood HL-60_CTRL 304 4 652 77 1 97 542 KRT80,C12ORF80,LINC00592,KRT7
SE_02_133100868 chr12:52189646-52207973 Sample_02_1331 Blood Molm13_CTRL 868 8 635 76 1 93 462 KRT80,C12ORF80,LINC00592,KRT7
SE_02_116600368 chr12:52192468-52208098 Sample_02_1166 Biliary H69_TGF beta_16h_1 368 1 527 63 1 69 291 C12ORF80,KRT80,LINC00592,KRT7
SE_02_116900413 chr12:52192468-52208345 Sample_02_1169 Biliary H69_TGF beta_16h_2 413 1 539 64 1 73 352 C12ORF80,KRT80,LINC00592,KRT7
SE_02_115100218 chr12:52192501-52208335 Sample_02_1151 Mammary gland MCF-7_UNTR 218 1 538 64 1 73 351 C12ORF80,KRT80,LINC00592,KRT7,C12orf80
SE_02_110500427 chr12:52196282-52210321 Sample_02_1105 Brain NBL-S 427 1 471 49 0 72 377 C12ORF80,KRT80,LINC00592,KRT7
SE_02_110800191 chr12:52197164-52209907 Sample_02_1108 Brain SK-N-BE_2_-C 191 1 419 43 0 66 377 C12ORF80,KRT80,LINC00592,KRT7
SE_02_110400300 chr12:52197180-52205922 Sample_02_1104 Brain NB-69 300 1 288 35 0 47 84 C12ORF80,KRT80,LINC00592,KRT7
SE_02_129400151 chr12:52197805-52217962 Sample_02_1294 Lung JHU-LX44-SCLC PDX 151 8 635 71 2 90 814 C12ORF80,LINC00592,KRT80,KRT7
SE_02_157500158 chr12:52197876-52215811 Sample_02_1575 Mammary gland MCF7_Mock 158 1 564 58 1 81 814 C12ORF80,LINC00592,KRT80,KRT7,C12orf80
SE_02_129500076 chr12:52197966-52207978 Sample_02_1295 Lung JHU-LX48-SCLC PDX 76 6 320 35 0 50 271 C12ORF80,KRT80,LINC00592,KRT7
SE_02_066700193 chr12:52198560-52205967 Sample_02_0667 Mammary gland MCF7_FA 193 1 243 31 0 38 93 C12ORF80,KRT80,LINC00592,KRT7,C12orf80
SE_02_124400335 chr12:52200430-52218881 Sample_02_1244 Brain KCNR_ATRA 335 10 578 72 3 71 814 C12ORF80,LINC00592,KRT80,KRT7
SE_02_111101069 chr12:52200438-52212727 Sample_02_1111 Other HGrC1_SMAD2/3KO 1069 1 379 42 0 55 699 C12ORF80,LINC00592,KRT80,KRT7
SE_02_088400743 chr12:52200516-52211744 Sample_02_0884 Colon LoVo 743 1 354 39 0 55 530 C12ORF80,LINC00592,KRT80,KRT7
SE_02_087200539 chr12:52203589-52231034 Sample_02_0872 Colon HCT116_siCtrl-5FU 539 4 803 111 5 71 935 C12ORF80,LINC00592,KRT80,KRT7
SE_02_102500597 chr12:52206266-52218234 Sample_02_1025 Esophagus KYSE150 597 1 367 42 3 45 683 C12ORF80,LINC00592,KRT80,KRT7
Genomic distribution of SEs associated with C12ORF80
Genome Browser

The strength of the tissue affected by the gene

Expression of C12ORF80

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)