SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000198093
Gene: ZNF649 Gene type: protein_coding
Strand: - External links:
Genomic region: chr19:51889235-51905040 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_095001227 chr19:51687624-51692444 Sample_02_0950 Umbilical vein HUVEC_WT 1227 1 113 9 0 64 4 SPACA6P-AS,MIRLET7E,MIR99B,MIR125A,HAS1,SPACA6P,SIGLEC14,ZNF836,ZNF577,FPR1,ZNF175,ZNF649
SE_02_083200519 chr19:51687681-51692036 Sample_02_0832 Umblical vein HUVECs_TNF30min 519 2 104 7 0 64 0 SPACA6P-AS,MIRLET7E,MIR99B,MIR125A,HAS1,SPACA6P,SIGLEC14,ZNF836,ZNF577,FPR1,ZNF175,ZNF649
SE_02_151900371 chr19:51687815-51692393 Sample_02_1519 Umbilical vein HUVEC_Scr_IL1beta 371 3 109 9 0 64 0 SPACA6P-AS,MIRLET7E,MIR99B,MIR125A,HAS1,SPACA6P,SIGLEC14,ZNF836,ZNF577,FPR1,ZNF175,ZNF649
SE_02_151800467 chr19:51687818-51691258 Sample_02_1518 Umbilical vein HUVEC_Scr 467 3 84 4 0 64 0 SPACA6P-AS,MIRLET7E,MIR99B,MIR125A,HAS1,SPACA6P,SIGLEC14,ZNF836,ZNF577,FPR1,ZNF175,ZNF649
SE_02_152000304 chr19:51687863-51691246 Sample_02_1520 Umbilical vein HUVEC_Notch1kd_IL1beta 304 2 83 4 0 64 0 SPACA6P-AS,MIRLET7E,MIR99B,MIR125A,HAS1,SPACA6P,SIGLEC14,ZNF836,ZNF577,FPR1,ZNF175,ZNF649
SE_02_149600033 chr19:51771105-51830302 Sample_02_1496 Other monocyte-derived dendritic cells_R848_24h 33 36 1590 190 7 0 368 FPR3,FPR2,HAS1,FPR1,ZNF577,ZNF432,ZNF350,ZNF649,ZNF613
SE_02_149400005 chr19:51771692-51830935 Sample_02_1494 Other monocyte-derived dendritic cells_0h 5 31 1593 192 7 0 368 FPR3,FPR2,HAS1,FPR1,ZNF577,ZNF432,ZNF350,ZNF649,ZNF613
SE_02_092900067 chr19:51771788-51829979 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 67 42 1577 190 7 0 368 FPR3,FPR2,HAS1,FPR1,ZNF577,SIGLEC6,ZNF350,ZNF649,ZNF613,ZNF615
SE_02_093000034 chr19:51778989-51830128 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 34 33 1384 178 7 0 368 FPR3,FPR2,FPR1,ZNF577,SIGLEC6,HAS1,ZNF350,ZNF649,ZNF613,ZNF615
SE_02_149500003 chr19:51784088-51829956 Sample_02_1495 Other monocyte-derived dendritic cells_R848_1h 3 28 1251 149 7 0 368 FPR3,FPR2,FPR1,ZNF577,HAS1,ZNF432,ZNF350,ZNF649,ZNF613
Genomic distribution of SEs associated with ZNF649
Genome Browser

The strength of the tissue affected by the gene

Expression of ZNF649

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)