SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000027869
Gene: SH2D2A Gene type: protein_coding
Strand: - External links:
Genomic region: chr1:156806243-156816848 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_090200881 chr1:156743068-156751500 Sample_02_0902 Heart left ventricle_LV1558 881 3 226 14 1 89 642 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,SH2D2A,MEF2D,NES,LRRC71
SE_02_076601042 chr1:156743076-156751689 Sample_02_0766 Ovary PEO1 1042 4 227 14 1 106 690 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,SH2D2A,NES
SE_02_098900994 chr1:156743635-156753153 Sample_02_0989 Kidney kidney cortex_WT 994 3 246 17 1 104 767 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,SH2D2A,NES,APOA1BP
SE_02_058400180 chr1:156743719-156752849 Sample_02_0584 Lung H1299 WT 180 3 238 16 1 104 750 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,NTRK1,SH2D2A,NES
SE_02_088900917 chr1:156743923-156752803 Sample_02_0889 Heart left ventricle_LV1183 917 2 223 14 0 104 702 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,SH2D2A,MEF2D,NES,LRRC71
SE_02_077100898 chr1:156744002-156751676 Sample_02_0771 Ovary OVCA429_shGRHL2 898 3 196 12 0 96 461 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,SH2D2A,NES
SE_02_089601021 chr1:156744010-156755901 Sample_02_0896 Heart left ventricle_LV1294 1021 4 313 24 0 106 743 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,SH2D2A,MEF2D,NES,LRRC71
SE_02_092900071 chr1:156744012-156769520 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 71 6 666 57 0 141 1165 HDGF,PRCC,SH2D2A,CRABP2,NTRK1,RRNAD1,ISG20L2,MRPL24,INSRR,NES,PEAR1
SE_02_090000818 chr1:156744127-156752574 Sample_02_0900 Heart left ventricle_LV1452 818 3 214 13 0 103 634 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,SH2D2A,MEF2D,NES,LRRC71
SE_02_090100897 chr1:156744169-156752800 Sample_02_0901 Heart left ventricle_LV1471 897 3 218 14 0 104 632 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,SH2D2A,MEF2D,NES,LRRC71
SE_01_009800742 chr1:156744381-156752795 Sample_01_0098 Heart left ventricle_51y 742 3 212 14 0 98 599 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,SH2D2A,MEF2D,NES,LRRC71
SE_02_088800867 chr1:156744686-156752845 Sample_02_0888 Heart left ventricle_LV1160 867 3 204 14 0 84 542 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,SH2D2A,MEF2D,NES,LRRC71
SE_02_089200846 chr1:156744786-156752848 Sample_02_0892 Heart left ventricle_LV1215 846 1 204 14 0 81 542 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,SH2D2A,MEF2D,NES,LRRC71
SE_02_089100820 chr1:156744815-156752844 Sample_02_0891 Heart left ventricle_LV1202 820 2 203 14 0 81 540 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,SH2D2A,MEF2D,NES,LRRC71
SE_02_048000392 chr1:156744822-156752715 Sample_02_0480 Gingival epithelial HGEP 392 4 201 14 0 80 539 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,NTRK1,PEAR1,SH2D2A
SE_02_076900629 chr1:156744845-156751700 Sample_02_0769 Ovary HEYA8 629 2 176 12 0 73 315 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,SH2D2A,NES
SE_02_089801024 chr1:156744866-156752850 Sample_02_0898 Heart left ventricle_LV1356 1024 2 200 14 0 81 529 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,SH2D2A,MEF2D,NES,LRRC71
SE_00_004900554 chr1:156744915-156749836 Sample_00_0049 Small intestine small intestine 30y 554 3 124 8 0 29 128 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,NTRK1,SH2D2A,APOA1BP,IQGAP3,BCAN
SE_01_010400517 chr1:156745053-156752628 Sample_01_0104 Lung upper lobe of left lung 517 2 192 13 0 78 483 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,NTRK1,PEAR1,SH2D2A,NES,GPATCH4
SE_02_082700183 chr1:156745388-156769939 Sample_02_0827 Stomach normal gastric 183 9 643 58 0 106 896 HDGF,PRCC,SH2D2A,CRABP2,NTRK1,RRNAD1,ISG20L2,MRPL24
SE_02_089900577 chr1:156745465-156752804 Sample_02_0899 Heart left ventricle_LV1400 577 2 189 14 0 69 394 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,SH2D2A,MEF2D,NES,LRRC71
SE_02_088700939 chr1:156745686-156753094 Sample_02_0887 Heart left ventricle_LV1121 939 1 189 13 0 68 388 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,SH2D2A,MEF2D,NES,LRRC71
SE_02_151300740 chr1:156745800-156751403 Sample_02_1513 Lung Transitional AT2->1 cells 740 1 148 10 0 33 91 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,NTRK1,PEAR1,SH2D2A,NES,GPATCH4
SE_02_089000770 chr1:156745890-156752617 Sample_02_0890 Heart left ventricle_LV1200 770 1 174 11 0 67 385 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,SH2D2A,MEF2D,NES,LRRC71
SE_00_005200470 chr1:156745901-156751730 Sample_00_0052 Heart left ventricle 3y 470 2 152 10 0 63 176 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,SH2D2A,MEF2D,NES,LRRC71
SE_01_011700207 chr1:156745948-156751519 Sample_01_0117 Lung fibroblast of lung 207 2 147 10 0 44 124 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,NTRK1,PEAR1,SH2D2A,NES,GPATCH4
SE_02_153300268 chr1:156745981-156751166 Sample_02_1533 Lung purified primary alveolar epithelial type 2 cells 268 2 135 9 0 32 21 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,NTRK1,PEAR1,SH2D2A,NES,GPATCH4
SE_02_151200266 chr1:156746033-156751165 Sample_02_1512 Lung Purified AT2 cells 266 1 135 9 0 32 21 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,NTRK1,PEAR1,SH2D2A,NES,GPATCH4
SE_02_089500798 chr1:156746174-156751527 Sample_02_0895 Heart left ventricle_LV1259 798 2 137 10 0 44 125 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,SH2D2A,MEF2D,NES,LRRC71
SE_02_151400866 chr1:156746201-156751081 Sample_02_1514 Lung Differentiated AT1-like cells 866 1 124 8 0 29 4 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,NTRK1,PEAR1,SH2D2A,NES,GPATCH4
SE_02_109900300 chr1:156862091-156927952 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 300 17 2088 112 9 386 4827 NTRK1,PEAR1,LRRC71,SH2D2A,MIR765,INSRR,PRCC,RRNAD1
SE_02_098800162 chr1:156862159-156926489 Sample_02_0988 Blood K562_EPZ 162 19 2039 110 9 371 4617 NTRK1,PEAR1,LRRC71,SH2D2A,MIR765,INSRR,PRCC,RRNAD1
Genomic distribution of SEs associated with SH2D2A
Genome Browser

The strength of the tissue affected by the gene

Expression of SH2D2A

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)