SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000136933
Gene: RABEPK Gene type: protein_coding
Strand: + External links:
Genomic region: chr9:125200542-125234161 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_122901442 chr9:125108146-125141489 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 1442 19 925 101 1 4 0 SCAI,PPP6C,HSPA5,RABEPK
SE_02_103300176 chr9:125235999-125286235 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 176 10 1316 68 0 144 717 HSPA5,GAPVD1,PPP6C,RABEPK
SE_04_000100345 chr9:125236203-125295886 Sample_04_0001 Blood heat shocked K562 345 9 1561 77 0 144 748 HSPA5,GAPVD1,PPP6C,RABEPK
SE_01_003900367 chr9:125238315-125246909 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 367 3 215 13 0 74 373 HSPA5,RABEPK,PPP6C,GAPVD1
SE_02_054501102 chr9:125241524-125248213 Sample_02_0545 Bone marrow K562 WT 1102 3 179 8 0 12 3 RABEPK,GAPVD1,HSPA5
SE_02_098700271 chr9:125241607-125286386 Sample_02_0987 Blood K562_Control_1 271 10 1202 61 0 34 175 GAPVD1,RABEPK,HSPA5
SE_02_109900508 chr9:125241608-125286500 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 508 10 1206 61 0 34 175 GAPVD1,RABEPK,HSPA5
Genomic distribution of SEs associated with RABEPK
Genome Browser

The strength of the tissue affected by the gene

Expression of RABEPK

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)