SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900367
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr9:125238315-125246909
Size: 8594
Super-enhancer rank 367
Number of SE elements: 3
ChIP density(Case|Control): 31921.5536|1439.495
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HSPA5 ;
ROSE Overlap HSPA5 ;
ROSE Proximal RABEPK ; PPP6C ; GAPVD1 ;
ROSE Closest HSPA5 ;
Lasso GAPVD1 ; HSPA5 ; RABEPK ;
PreSTIGE GAPVD1 ; RABEPK ;
ABC ;
BETA GAPVD1 ; RABEPK ; PPP6C ; SCAI ; HSPA5 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900367 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers