SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000119403
Gene: PHF19 Gene type: protein_coding
Strand: - External links:
Genomic region: chr9:120855651-120894896 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_122900671 chr9:120757747-120795126 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 671 24 934 56 0 135 1235 LOC100288842,FBXW2,PSMD5-AS1,PSMD5,MEGF9,PHF19
SE_04_000101025 chr9:120764476-120794699 Sample_04_0001 Blood heat shocked K562 1025 4 753 43 0 123 556 LOC100288842,FBXW2,PSMD5-AS1,PSMD5,MEGF9,PHF19
SE_02_087500595 chr9:120866210-120937610 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 595 18 1788 244 20 41 2462 TRAF1,PHF19,PSMD5-AS1,PSMD5,FBXW2
SE_02_059100022 chr9:120879721-120937980 Sample_02_0591 PBMCs adult CD4+CD25-CD45RA+CD27+ naive T cells 22 21 1485 216 19 32 1475 PHF19,TRAF1,PSMD5-AS1,PSMD5,FBXW2
SE_02_142900150 chr9:120889768-120953989 Sample_02_1429 Blood GM12878_WT 150 16 1627 229 20 45 1599 PHF19,C5,TRAF1,PSMD5-AS1,PSMD5
SE_02_149600040 chr9:120918646-120936523 Sample_02_1496 Other monocyte-derived dendritic cells_R848_24h 40 10 424 65 8 28 447 TRAF1,PHF19,PSMD5
SE_02_149400095 chr9:120919108-120935930 Sample_02_1494 Other monocyte-derived dendritic cells_0h 95 11 390 60 7 25 447 TRAF1,PHF19,PSMD5
SE_02_149500013 chr9:120920001-120936518 Sample_02_1495 Other monocyte-derived dendritic cells_R848_1h 13 14 386 60 8 27 447 TRAF1,PHF19,PSMD5
SE_02_121800737 chr9:121062124-121075608 Sample_02_1218 Bone marrow Daudi 737 9 318 36 0 19 136 C5,CNTRL,TRAF1,PHF19,GSN
Genomic distribution of SEs associated with PHF19
Genome Browser

The strength of the tissue affected by the gene

Expression of PHF19

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)