SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000187800
Gene: PEAR1 Gene type: protein_coding
Strand: + External links:
Genomic region: chr1:156893698-156916434 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_092900071 chr1:156744012-156769520 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 71 6 666 57 0 141 1165 HDGF,PRCC,SH2D2A,CRABP2,NTRK1,RRNAD1,ISG20L2,MRPL24,INSRR,NES,PEAR1
SE_02_048000392 chr1:156744822-156752715 Sample_02_0480 Gingival epithelial HGEP 392 4 201 14 0 80 539 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,NTRK1,PEAR1,SH2D2A
SE_01_010400517 chr1:156745053-156752628 Sample_01_0104 Lung upper lobe of left lung 517 2 192 13 0 78 483 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,NTRK1,PEAR1,SH2D2A,NES,GPATCH4
SE_02_151300740 chr1:156745800-156751403 Sample_02_1513 Lung Transitional AT2->1 cells 740 1 148 10 0 33 91 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,NTRK1,PEAR1,SH2D2A,NES,GPATCH4
SE_02_094600109 chr1:156745841-156752727 Sample_02_0946 Tongue HN12 109 1 177 12 0 68 388 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,PEAR1,MEF2D,NES,LRRC71
SE_02_094700214 chr1:156745930-156752794 Sample_02_0947 Tongue Cal27 214 2 174 12 0 68 388 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,PEAR1,MEF2D,NES,LRRC71
SE_01_011700207 chr1:156745948-156751519 Sample_01_0117 Lung fibroblast of lung 207 2 147 10 0 44 124 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,NTRK1,PEAR1,SH2D2A,NES,GPATCH4
SE_02_153300268 chr1:156745981-156751166 Sample_02_1533 Lung purified primary alveolar epithelial type 2 cells 268 2 135 9 0 32 21 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,NTRK1,PEAR1,SH2D2A,NES,GPATCH4
SE_02_151200266 chr1:156746033-156751165 Sample_02_1512 Lung Purified AT2 cells 266 1 135 9 0 32 21 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,NTRK1,PEAR1,SH2D2A,NES,GPATCH4
SE_02_151400866 chr1:156746201-156751081 Sample_02_1514 Lung Differentiated AT1-like cells 866 1 124 8 0 29 4 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24,NTRK1,PEAR1,SH2D2A,NES,GPATCH4
SE_02_109900300 chr1:156862091-156927952 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 300 17 2088 112 9 386 4827 NTRK1,PEAR1,LRRC71,SH2D2A,MIR765,INSRR,PRCC,RRNAD1
SE_02_098800162 chr1:156862159-156926489 Sample_02_0988 Blood K562_EPZ 162 19 2039 110 9 371 4617 NTRK1,PEAR1,LRRC71,SH2D2A,MIR765,INSRR,PRCC,RRNAD1
Genomic distribution of SEs associated with PEAR1
Genome Browser

The strength of the tissue affected by the gene

Expression of PEAR1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)