SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000129347
Gene: KRI1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr19:10553085-10566031 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_122901030 chr19:10483474-10507482 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 1030 10 655 61 2 102 1116 KEAP1,ATG4D,S1PR5,MIR1238,PDE4A,CDC37,KRI1,CDKN2D
SE_00_005501025 chr19:10553763-10569048 Sample_00_0055 Spleen spleen 34y 1025 2 539 64 3 0 1864 CDKN2D,KRI1,AP1M2,ATG4D,S1PR5,MIR1238,SLC44A2
SE_02_121800354 chr19:10572220-10606079 Sample_02_1218 Bone marrow Daudi 354 11 951 128 2 40 1235 AP1M2,SLC44A2,ILF3-AS1,CDKN2D,ILF3,ATG4D,MIR1238,KRI1,FDX1L,S1PR5
SE_00_003100509 chr19:10586520-10623881 Sample_00_0031 Placenta placenta 509 4 1042 126 1 25 285 AP1M2,SLC44A2,LOC147727,ATG4D,CDKN2D,ILF3,MIR1238,KRI1,AP12,KEAP1,PDE4A,S1PR5
SE_00_005500230 chr19:10591743-10618100 Sample_00_0055 Spleen spleen 34y 230 13 749 93 0 19 160 SLC44A2,ILF3-AS1,AP1M2,CDKN2D,ILF3,ATG4D,MIR1238,KRI1,DNM2,AC011475.1,PDE4A,KEAP1
SE_02_073900905 chr19:10593239-10606725 Sample_02_0739 Blood Nalm6 905 6 352 39 0 17 160 SLC44A2,ILF3-AS1,AP1M2,CDKN2D,ILF3,ATG4D,MIR1238,KRI1,FDX1L,SMARCA4,S1PR5,TYK2,KEAP1,QTRT1,RAVER1
SE_02_059300369 chr19:10602039-10605232 Sample_02_0593 Fetal spleenocytes fetal naive T cells 369 1 76 9 0 14 160 SLC44A2,ILF3-AS1,AP1M2,CDKN2D,ILF3,MIR1238,KRI1,PDE4A,KEAP1,ATG4D
SE_02_059100505 chr19:10602340-10605463 Sample_02_0591 PBMCs adult CD4+CD25-CD45RA+CD27+ naive T cells 505 1 79 9 0 14 137 SLC44A2,ILF3-AS1,AP1M2,CDKN2D,ILF3,KRI1,PDE4A,QTRT1,KEAP1
SE_04_000101078 chr19:10644216-10659442 Sample_04_0001 Blood heat shocked K562 1078 3 489 35 1 38 642 ILF3,SLC44A2,ILF3-AS1,QTRT1,DNM2,KEAP1,TMED1,KRI1,CDKN2D,C19orf38
SE_02_122901203 chr19:10647106-10675477 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 1203 12 953 64 1 58 709 ILF3,ILF3-AS1,MIR638,SLC44A2,DNM2,QTRT1,KEAP1,TMED1,KRI1,CDKN2D,C19orf38
Genomic distribution of SEs associated with KRI1
Genome Browser

The strength of the tissue affected by the gene

Expression of KRI1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)