SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_122901203
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Control
Genomic region: chr19:10647106-10675477
Size: 28371
Super-enhancer rank 1203
Number of SE elements: 12
ChIP density(Case|Control): 17280.7761|3398.8458
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ILF3 ;
ROSE Overlap ILF3 ; ILF3-AS1 ;
ROSE Proximal MIR638 ; ILF3 ; SLC44A2 ; DNM2 ; QTRT1 ;
ROSE Closest ILF3 ;
Lasso DNM2 ; KEAP1 ; TMED1 ; KRI1 ; SLC44A2 ; CDKN2D ; C19orf38 ;
PreSTIGE ;
ABC ATG4D ;
BETA AP1M2 ; DNM2 ; CDKN2D ; SLC44A2 ; ILF3 ; MIR638 ; QTRT1 ; ILF3-AS1 ; KRI1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122901203 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers