SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000131650
Gene: KREMEN2 Gene type: protein_coding
Strand: + External links:
Genomic region: chr16:2964216-2968383 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_04_000200753 chr16:2737879-2772105 Sample_04_0002 Blood cold shocked K562 753 3 1263 33 0 321 3188 SRRM2-AS1,SRRM2,TCEB2,PRSS33,PRSS41,PRSS27,PRSS21,PKMYT1,KREMEN2,PAQR4,ECI1,KCTD5,RNPS1
SE_02_113000817 chr16:2738434-2755595 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 817 6 553 16 0 19 867 SRRM2-AS1,SRRM2,TCEB2,PRSS33,PRSS41,PRSS27,PRSS21,PKMYT1,KREMEN2,PAQR4,ECI1,KCTD5,RNPS1
SE_02_111600736 chr16:2738560-2755952 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 736 4 565 16 0 20 849 SRRM2-AS1,SRRM2,TCEB2,PRSS33,PRSS41,PRSS27,PRSS21,PKMYT1,KREMEN2,PAQR4,ECI1,KCTD5,RNPS1
SE_04_000101050 chr16:2738621-2771930 Sample_04_0001 Blood heat shocked K562 1050 3 1241 32 0 320 3047 SRRM2-AS1,SRRM2,TCEB2,PRSS33,PRSS41,PRSS27,PRSS21,PKMYT1,KREMEN2,PAQR4,ECI1,KCTD5,RNPS1
SE_04_000200487 chr16:2967750-2984273 Sample_04_0002 Blood cold shocked K562 487 3 545 29 1 149 2208 PKMYT1,KREMEN2,PAQR4,LOC100128770,THOC6,CLDN9,LOC101929613,TNFRSF12A,CLDN6,HCFC1R1,LINC00514,CCDC64B,ZNF213,FLYWCH2,MMP25,TCEB2
SE_04_000101045 chr16:2977857-2984259 Sample_04_0001 Blood heat shocked K562 1045 1 184 14 0 9 362 PKMYT1,LOC100128770,THOC6,CLDN9,LOC101929613,TNFRSF12A,CLDN6,PAQR4,KREMEN2,HCFC1R1,LINC00514,CCDC64B,ZNF213,FLYWCH2,MMP25,TCEB2
SE_02_113000857 chr16:2978770-2983822 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 857 1 144 14 0 9 362 PKMYT1,LOC100128770,THOC6,CLDN9,LOC101929613,TNFRSF12A,CLDN6,PAQR4,KREMEN2,HCFC1R1,LINC00514,CCDC64B,ZNF213,FLYWCH2,MMP25,TCEB2
SE_02_111600434 chr16:2979310-2984204 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 434 1 127 13 0 9 362 PKMYT1,LOC100128770,THOC6,CLDN9,LOC101929613,TNFRSF12A,CLDN6,PAQR4,KREMEN2,HCFC1R1,LINC00514,CCDC64B,ZNF213,FLYWCH2,MMP25,TCEB2
SE_02_109900922 chr16:2979323-2984264 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 922 3 128 13 0 9 362 PKMYT1,LOC100128770,THOC6,CLDN9,LOC101929613,TNFRSF12A,CLDN6,PAQR4,KREMEN2,HCFC1R1,LINC00514,CCDC64B,ZNF213,FLYWCH2,MMP25,TCEB2
SE_02_054500835 chr16:2979340-2984155 Sample_02_0545 Bone marrow K562 WT 835 1 124 13 0 9 362 PKMYT1,LOC100128770,THOC6,CLDN9,LOC101929613,TNFRSF12A,CLDN6,PAQR4,KREMEN2,HCFC1R1,LINC00514,CCDC64B,ZNF213,FLYWCH2,MMP25,TCEB2
SE_02_054600330 chr16:2979427-2983827 Sample_02_0546 Bone marrow K562_MYO1D Non-hub KO 330 2 115 13 0 9 362 PKMYT1,LOC100128770,THOC6,CLDN9,LOC101929613,TNFRSF12A,CLDN6,PAQR4,KREMEN2,HCFC1R1,LINC00514,CCDC64B,ZNF213,FLYWCH2,MMP25,TCEB2
SE_02_054700446 chr16:2979559-2982833 Sample_02_0547 Bone marrow K562_MYO1D_Hub_KO 446 1 88 12 0 9 341 PKMYT1,LOC100128770,THOC6,CLDN9,LOC101929613,TNFRSF12A,CLDN6,PAQR4,KREMEN2,HCFC1R1,LINC00514,CCDC64B,ZNF213,FLYWCH2,MMP25,TCEB2
SE_02_047700945 chr16:3004096-3010411 Sample_02_0477 Colon intestinal epithelial organoids_139a 945 1 165 16 0 33 0 LOC100128770,PKMYT1,MMP25-AS1,THOC6,CCDC64B,CLDN9,MMP25,LOC101929613,TNFRSF12A,CLDN6,PAQR4,KREMEN2,HCFC1R1,LINC00514,IL32,ZNF200,ZNF205,ZG16B
Genomic distribution of SEs associated with KREMEN2
Genome Browser

The strength of the tissue affected by the gene

Expression of KREMEN2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)