SEdb 2.0
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Super-enhancer overview

SE ID: SE_04_000200487
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr16:2967750-2984273
Size: 16523
Super-enhancer rank 487
Number of SE elements: 3
ChIP density(Case|Control): 52830.6402|2427.2287
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PKMYT1;
ROSE Overlap PKMYT1; KREMEN2; PAQR4;
ROSE Proximal LOC100128770; THOC6; CLDN9; LOC101929613; TNFRSF12A; CLDN6; PAQR4; KREMEN2; HCFC1R1; LINC00514;
ROSE Closest PKMYT1;
Lasso CCDC64B; ZNF213; FLYWCH2; HCFC1R1; MMP25; THOC6; KREMEN2; TCEB2;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200487 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers