SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID:
Gene: H2AFV Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_122901169 chr7:44563488-44582189 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 1169 11 581 76 9 123 1630 TMED4,DDX56,OGDH,NPC1L1,NUDCD3,H2AFV,CCM2,PURB,PPIA
SE_02_152900344 chr7:44589394-44664424 Sample_02_1529 Peripheral blood neutrophils_0BC75 344 18 2090 165 5 108 395 OGDH,DDX56,NPC1L1,TMED4,ZMIZ2,PPIA,NUDCD3,H2AFV
SE_02_153000431 chr7:44602200-44664046 Sample_02_1530 Peripheral blood neutrophils_0BA0X 431 13 1756 133 5 107 395 OGDH,DDX56,TMED4,ZMIZ2,PPIA,NUDCD3,H2AFV
SE_02_153100399 chr7:44603864-44640959 Sample_02_1531 Peripheral blood neutrophils_0B9ZK 399 9 1090 94 3 57 179 OGDH,DDX56,TMED4,ZMIZ2,PPIA,NUDCD3,H2AFV
SE_02_092800590 chr7:44604064-44640976 Sample_02_0928 Peripheral blood neutrophils_Ecoli 590 6 1084 94 3 57 179 OGDH,DDX56,TMED4,ZMIZ2,PPIA,NUDCD3,H2AFV
SE_02_092700317 chr7:44604450-44642242 Sample_02_0927 Peripheral blood neutrophils_US 317 12 1115 96 3 57 179 OGDH,DDX56,TMED4,ZMIZ2,PPIA,NUDCD3,H2AFV
SE_02_142900905 chr7:44611578-44640699 Sample_02_1429 Blood GM12878_WT 905 10 870 78 3 33 68 OGDH,DDX56,TMED4,NUDCD3,H2AFV,ZMIZ2
Genomic distribution of SEs associated with H2AFV
Genome Browser

The strength of the tissue affected by the gene

Expression of H2AFV

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)