SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_122901169
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Control
Genomic region: chr7:44563488-44582189
Size: 18701
Super-enhancer rank 1169
Number of SE elements: 11
ChIP density(Case|Control): 16705.6033|2571.3875
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DDX56 ;
ROSE Overlap TMED4 ; DDX56 ;
ROSE Proximal OGDH ; NPC1L1 ; TMED4 ;
ROSE Closest DDX56 ;
Lasso NUDCD3 ; H2AFV ; CCM2 ; PURB ; TMED4 ; PPIA ;
PreSTIGE ;
ABC NPC1L1 ;
BETA NUDCD3 ; DDX56 ; NPC1L1 ; TMED4 ; OGDH ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122901169 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers