SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000124092
Gene: CTCFL Gene type: protein_coding
Strand: - External links:
Genomic region: chr20:57495966-57525652 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_087500461 chr20:57354773-57454592 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 461 28 3330 219 19 154 1654 RAE1,MTRNR2L3,RBM38,SPO11,MIR4325,CTCFL
SE_02_122900209 chr20:57373882-57464514 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 209 37 3019 178 17 139 1261 RAE1,RBM38,SPO11,MTRNR2L3,CTCFL,PCK1
SE_04_000101160 chr20:57408033-57465548 Sample_04_0001 Blood heat shocked K562 1160 11 1868 100 17 56 347 RBM38,MTRNR2L3,RAE1,CTCFL,PCK1
SE_02_098800926 chr20:57409213-57434151 Sample_02_0988 Blood K562_EPZ 926 11 810 45 9 27 96 RBM38,MTRNR2L3,RAE1,CTCFL,PCK1
SE_02_047800740 chr20:57522578-57570926 Sample_02_0478 Colon normal colon mucosa 740 19 1447 84 10 175 1416 CTCFL,PCK1,ZBP1
SE_00_004900109 chr20:57531760-57590813 Sample_00_0049 Small intestine small intestine 30y 109 24 1905 97 12 229 791 PCK1,ZBP1,CTCFL
Genomic distribution of SEs associated with CTCFL
Genome Browser

The strength of the tissue affected by the gene

Expression of CTCFL

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)