SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000221845
Gene: C7ORF65 Gene type: lncRNA
Strand: + External links:
Genomic region: chr7:47655244-47661648 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_049200045 chr7:47529385-47611036 Sample_02_0492 Pharyng Detroit 562_LPS 45 19 2406 79 2 158 227 TNS3,LINC01447,C7ORF65,C7orf65
SE_02_049100057 chr7:47529547-47608530 Sample_02_0491 Pharyng Detroit 562-Control 57 14 2339 77 2 152 227 TNS3,LINC01447,C7ORF65,C7orf65
SE_02_144900069 chr7:47533552-47624346 Sample_02_1449 Adipose SW872_YAP_TFE3 69 21 2720 93 2 167 227 TNS3,LINC01447,C7ORF65,C7orf65
SE_02_144400028 chr7:47534096-47611850 Sample_02_1444 Adipose SW872_Empty Vector 28 20 2334 79 2 161 227 TNS3,LINC01447,C7ORF65,C7orf65
SE_02_060600115 chr7:47535417-47623965 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 115 13 2652 90 2 157 227 TNS3,LINC01447,C7ORF65,C7orf65
SE_02_060500120 chr7:47535585-47636947 Sample_02_0605 Skin Skin Fibroblast_DMSO 120 17 3094 104 3 167 227 TNS3,LINC01447,C7ORF65,C7orf65
SE_02_072700433 chr7:47535645-47611510 Sample_02_0727 Fetal lung IMR90_Etoposide 433 11 2276 76 2 149 227 TNS3,LINC01447,C7ORF65,C7orf65
SE_02_158300362 chr7:47552899-47610567 Sample_02_1583 Fetal lung IMR90_empty_GM 362 16 1680 69 1 107 143 TNS3,LINC01447,C7ORF65,C7orf65
SE_02_056100013 chr7:47556376-47613227 Sample_02_0561 Lung A549_1 13 14 1654 67 1 116 143 TNS3,LINC01447,C7ORF65,C7orf69,C7orf65
SE_02_094800040 chr7:47557011-47607543 Sample_02_0948 Pharyng Detroit562 40 8 1476 56 1 106 143 TNS3,LINC01447,C7ORF65,C7orf65
SE_02_144800396 chr7:47557574-47580384 Sample_02_1448 Adipose SW872_YAP5SA 396 6 634 22 1 47 0 TNS3,LINC01447,C7orf65
SE_02_147200276 chr7:47557934-47624075 Sample_02_1472 Fetal lung IMR-90 276 10 1930 76 1 121 143 TNS3,LINC01447,C7ORF65,C7orf65
SE_02_144500501 chr7:47569895-47584472 Sample_02_1445 Adipose SW872_TAZ4SA 501 1 414 14 0 73 143 TNS3,LINC01447,C7orf65
SE_02_094100001 chr7:47570501-47612490 Sample_02_0941 Brain T98G 1 12 1263 53 0 107 143 TNS3,LINC01447,C7ORF65,C7orf65
SE_02_049800207 chr7:47570687-47610685 Sample_02_0498 Fetal lung IMR90 Senescent_1 207 18 1202 51 0 98 143 TNS3,LINC01447,C7ORF65,C7orf65
SE_02_049700278 chr7:47600372-47610488 Sample_02_0497 Fetal lung IMR90_#1 278 7 297 16 0 22 0 TNS3,LINC01447,C7ORF65,C7orf65
SE_04_001000580 chr7:47632064-47670335 Sample_04_0010 Lung A549 TGFb 580 7 1285 55 2 34 661 C7ORF65,TNS3,LINC01447,C7orf65
SE_02_094801098 chr7:47633971-47653825 Sample_02_0948 Pharyng Detroit562 1098 4 635 36 0 29 0 LINC01447,C7ORF65,C7orf65,TNS3
SE_02_049800452 chr7:47634038-47670652 Sample_02_0498 Fetal lung IMR90 Senescent_1 452 9 1222 54 1 33 661 C7ORF65,LINC01447,TNS3,C7orf69,C7orf65
SE_04_000900552 chr7:47634152-47670549 Sample_04_0009 Lung A549 552 9 1217 53 1 33 661 C7ORF65,LINC01447,C7orf65,TNS3
SE_02_094100017 chr7:47635458-47691692 Sample_02_0941 Brain T98G 17 15 1921 115 1 63 661 C7ORF65,LINC01447,C7orf65,C7orf69
SE_02_111500555 chr7:47635509-47672839 Sample_02_1115 Liver HepG2 555 10 1267 63 1 33 661 C7ORF65,LINC01447,TNS3,C7orf65
SE_00_003100685 chr7:47666208-47694358 Sample_00_0031 Placenta placenta 685 4 949 80 2 37 0 C7ORF65,C7orf65,TNS3,C7ORF69
SE_02_093000976 chr7:47666780-47694126 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 976 14 924 80 1 37 0 LINC01447,C7ORF65,TNS3,C7orf65
SE_02_050000087 chr7:47722103-47819360 Sample_02_0500 Fetal lung IMR90_#2 87 42 3088 192 13 141 1117 C7ORF69,PKD1L1,LINC00525,TNS3,C7orf69,C7orf65
SE_02_056100059 chr7:47762078-47788835 Sample_02_0561 Lung A549_1 59 11 792 64 3 46 266 PKD1L1,LINC00525,C7ORF69,C7orf69,C7orf65
Genomic distribution of SEs associated with C7ORF65
Genome Browser

The strength of the tissue affected by the gene

Expression of C7ORF65

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)