SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000204991
Gene: SPIRE2 Gene type: protein_coding
Strand: + External links:
Genomic region: chr16:89818179-89871319 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_121800085 chr16:89803393-89861304 Sample_02_1218 Bone marrow Daudi 85 24 2292 306 8 93 1925 SPIRE2,FANCA,TCF25
SE_02_024200175 chr16:89810309-89854884 Sample_02_0242 Colon V481 175 7 1705 239 6 68 1185 SPIRE2,FANCA,TCF25
SE_02_023700104 chr16:89810418-89861472 Sample_02_0237 Colon V389 104 14 1959 263 6 90 1815 SPIRE2,FANCA,TCF25
SE_02_139700152 chr16:89814495-89865378 Sample_02_1397 Stomach SNU16 152 8 1899 259 6 86 1872 SPIRE2,FANCA,TCF25
SE_02_146500294 chr16:89814539-89837511 Sample_02_1465 Ovary CAOV4cis 294 8 882 120 4 37 625 SPIRE2,FANCA,TCF25
SE_02_056300197 chr16:89814651-89848310 Sample_02_0563 Mammary gland MCF7L-P_0h 197 12 1265 180 5 45 689 SPIRE2,FANCA,TCF25
SE_01_003800267 chr16:89815544-89839206 Sample_01_0038 Liver HepG2 267 4 912 125 4 36 593 SPIRE2,FANCA,TCF25,C16ORF7,C1R,TUBB3,ZNF276
SE_00_003100656 chr16:89816506-89844214 Sample_00_0031 Placenta placenta 656 6 1039 153 5 41 418 SPIRE2,FANCA,TCF25
SE_02_092900968 chr16:89818917-89843571 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 968 12 915 128 3 38 322 SPIRE2,TCF25,FANCA,TUBB3,DEF8,SPATA33,GAS8,CENPBD1
SE_02_127300846 chr16:89818989-89848182 Sample_02_1273 Cervix HeLa 846 11 1073 152 3 41 394 SPIRE2,TCF25,FANCA,MC1R
SE_02_115100195 chr16:89819004-89871905 Sample_02_1151 Mammary gland MCF-7_UNTR 195 29 1912 253 5 101 2026 SPIRE2,TCF25,MC1R,FANCA,TUBB3,DEF8
SE_02_157800375 chr16:89819530-89845123 Sample_02_1578 Mammary gland MCF7_DAC+455 375 14 946 136 3 38 322 SPIRE2,TCF25,FANCA,MC1R,TUBB3
SE_02_082600644 chr16:89819779-89870193 Sample_02_0826 Stomach gastric tumor 644 18 1832 248 5 95 1769 SPIRE2,TCF25,MC1R,FANCA
SE_02_146400471 chr16:89820005-89846039 Sample_02_1464 Ovary CAOV4 471 5 947 139 3 39 394 SPIRE2,TCF25,FANCA
SE_02_103200574 chr16:89820117-89862294 Sample_02_1032 Head and neck SCC1 JQ1 574 8 1551 219 4 79 1425 SPIRE2,TCF25,FANCA
SE_02_001500285 chr16:89821353-89840324 Sample_02_0015 Liver HepG2_shNS 285 4 706 101 2 32 322 SPIRE2,TCF25,FANCA
SE_00_003601299 chr16:89821366-89848443 Sample_00_0036 Small intestine small-intestine_108days 1299 5 990 144 3 41 394 SPIRE2,TCF25,FANCA
SE_02_024100095 chr16:89821415-89854167 Sample_02_0241 Colon V456 95 9 1174 178 4 53 642 SPIRE2,TCF25,FANCA
SE_02_070300353 chr16:89821429-89853553 Sample_02_0703 Pancreas PATU8988S WT 353 6 1142 174 3 51 629 SPIRE2,TCF25,FANCA
SE_02_008600374 chr16:89821471-89854753 Sample_02_0086 Pancreas CAPAN1 374 5 1213 183 4 57 770 SPIRE2,TCF25,FANCA
SE_01_007900691 chr16:89821718-89865167 Sample_01_0079 Peyers patch Peyers-patch 691 7 1591 223 4 81 1567 SPIRE2,TCF25,FANCA
SE_02_082700899 chr16:89821736-89839203 Sample_02_0827 Stomach normal gastric 899 4 643 93 2 32 322 SPIRE2,TCF25,FANCA
SE_02_005100159 chr16:89821858-89848576 Sample_02_0051 Mammary gland MCF-7_EtOH 159 6 971 145 3 41 394 SPIRE2,TCF25,FANCA
SE_02_080900574 chr16:89821871-89843612 Sample_02_0809 Mammary gland T47D Serum 574 4 796 119 3 38 322 SPIRE2,TCF25,FANCA
SE_02_137100225 chr16:89821903-89848389 Sample_02_1371 Pancreas Patu899S-untreated 225 12 962 144 3 41 394 SPIRE2,TCF25,FANCA
SE_02_125500390 chr16:89821939-89847980 Sample_02_1255 Bladder Bladder tumor Luminal2 390 5 949 141 3 41 394 SPIRE2,TCF25,FANCA
SE_02_062400395 chr16:89821997-89848352 Sample_02_0624 Mammary gland TAMR_VEH 395 5 960 143 3 41 394 SPIRE2,TCF25,FANCA
SE_02_125800068 chr16:89822011-89875961 Sample_02_1258 Liver Pancreatic cancer cells derived from liver metastasis 68 14 1944 259 5 120 2210 SPIRE2,TCF25,MC1R,FANCA,TUBB3
SE_02_047700346 chr16:89822046-89854267 Sample_02_0477 Colon intestinal epithelial organoids_139a 346 10 1151 178 4 53 664 SPIRE2,TCF25,FANCA,TUBB3,DEF8,SPATA33,MC1R,CHMP1A,SPATA2L
SE_00_004900463 chr16:89822047-89854138 Sample_00_0049 Small intestine small intestine 30y 463 13 1147 177 4 53 634 SPIRE2,TCF25,FANCA,CDK10,TUBB3,DEF8,MC1R,CHMP1A,ZNF276,SPATA2L
SE_02_136700090 chr16:89822057-89864353 Sample_02_1367 Pancreas Capan1-untreated 90 11 1551 221 4 81 1567 SPIRE2,TCF25,FANCA
SE_02_136500486 chr16:89822062-89853838 Sample_02_1365 Pancreas AsPC1-untreated 486 12 1135 175 4 51 629 SPIRE2,TCF25,FANCA
SE_02_047800489 chr16:89822114-89854109 Sample_02_0478 Colon normal colon mucosa 489 7 1146 177 4 53 629 SPIRE2,TCF25,FANCA,CDK10,TUBB3,DEF8,ACSF3,ZNF276
SE_00_003500669 chr16:89822120-89848501 Sample_00_0035 Sigmoid colon sigmoid-colon 669 8 961 143 3 41 394 SPIRE2,TCF25,FANCA
SE_02_062300470 chr16:89822162-89848202 Sample_02_0623 Mammary gland TAMR_E2 470 5 952 142 3 41 394 SPIRE2,TCF25,FANCA
SE_02_071800288 chr16:89822169-89853523 Sample_02_0718 Pancreas PATU8988S_GFP_DOX 288 10 1115 173 3 51 629 SPIRE2,TCF25,FANCA
SE_01_010901065 chr16:89822326-89864603 Sample_01_0109 Colon transverse colon_54y 1065 12 1550 217 4 81 1567 SPIRE2,TCF25,FANCA,CDK10,TUBB3,DEF8,ACSF3,ZNF276
SE_02_023600283 chr16:89822624-89853628 Sample_02_0236 Colon V206 283 10 1100 169 3 50 629 SPIRE2,TCF25,FANCA
SE_02_072200294 chr16:89822732-89848145 Sample_02_0722 Pancreas PATU8988S_TP63dN_DOX 294 12 923 137 2 39 394 SPIRE2,TCF25,FANCA
SE_00_005600942 chr16:89822848-89864777 Sample_00_0056 Sigmoid colon sigmoid colon 3y 942 11 1535 216 3 79 1567 SPIRE2,TCF25,FANCA
SE_02_024000790 chr16:89827088-89854217 Sample_02_0240 Colon V429_2 790 9 956 153 3 50 654 SPIRE2,TCF25,FANCA
SE_02_070900490 chr16:89828576-89854274 Sample_02_0709 Pancreas hT85_organoid 490 9 922 146 3 41 553 SPIRE2,TCF25,FANCA
SE_02_035300795 chr16:89828606-89854322 Sample_02_0353 Colon HT29 795 7 923 146 3 41 552 SPIRE2,TCF25,FANCA
Genomic distribution of SEs associated with SPIRE2
Genome Browser

The strength of the tissue affected by the gene

Expression of SPIRE2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)