SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000167182
Gene: SP2 Gene type: protein_coding
Strand: + External links:
Genomic region: chr17:47896150-47928957 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_009500114 chr17:47842833-47915050 Sample_02_0095 Mammary gland MDA-MB-468 114 11 1852 256 10 599 2391 SP2,SP6,LRRC46,PNPO,OSBPL7,PRR15L,MRPL10,SCRN2
SE_02_125300337 chr17:47843318-47914594 Sample_02_1253 Mammary gland CAMA1 ER+/FGFR1-amplified 337 26 1837 254 10 599 2391 SP2,SP6,SP2-AS1,PNPO,MRPL10,OSBPL7,LRRC46,SCRN2,PRR15L
SE_02_101701449 chr17:47843395-47905443 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 1449 13 1650 238 7 579 2391 SP2,SP6,SP2-AS1,PNPO,MRPL10,OSBPL7,LRRC46,SCRN2
SE_02_146000162 chr17:47843432-47918619 Sample_02_1460 Blood Mutz-3 162 15 1924 266 11 646 2776 SP2,SP6,SP2-AS1,PNPO,MRPL10,OSBPL7,LRRC46,SCRN2,PRR15L
SE_02_103100226 chr17:47859787-47902925 Sample_02_1031 Head and neck SCC1 contol 226 14 1198 156 5 354 1208 SP2,SP2-AS1,PNPO,MRPL10,OSBPL7,LRRC46,SCRN2,SP6
SE_02_114500422 chr17:47860801-47907320 Sample_02_1145 Peripheral nerve SNF02.2_PRC2 WT 422 17 1273 166 6 367 1208 SP2,SP2-AS1,PNPO,MRPL10,OSBPL7,LRRC46,SCRN2,SP6
SE_02_103500648 chr17:47861888-47915167 Sample_02_1035 Mammary gland HCC70_Vehicle 648 24 1401 178 9 346 1214 SP2,SP2-AS1,PNPO,MRPL10,OSBPL7,LRRC46,SCRN2,SP6,PRR15L
SE_02_087200225 chr17:47863658-47889837 Sample_02_0872 Colon HCT116_siCtrl-5FU 225 7 764 103 4 231 709 SP6,MRPL10,OSBPL7,LRRC46,SP2,SCRN2
SE_00_003101224 chr17:47864213-47906486 Sample_00_0031 Placenta placenta 1224 6 1170 154 6 322 1143 SP2,LRRC46,PNPO,MRPL10,SP6,OSBPL7,SCRN2,CDK5RAP3,PRR15L
SE_01_007200293 chr17:47864385-47930950 Sample_01_0072 Breast epithelium breast-epithelium 293 9 1729 212 10 450 2101 SP2,LRRC46,PNPO,OSBPL7,PRR15L,SP6,MRPL10,SCRN2,CDK5RAP3
SE_02_129700255 chr17:47864669-47906670 Sample_02_1297 Lung lung 255 14 1162 152 6 323 1084 SP2,SP2-AS1,PNPO,MRPL10,OSBPL7,LRRC46,SCRN2,SP6
SE_02_064500844 chr17:47864778-47905703 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 844 8 1140 152 6 319 1059 SP2,SP2-AS1,PNPO,MRPL10,OSBPL7,LRRC46,SCRN2,SP6
SE_02_155600062 chr17:47864782-47907484 Sample_02_1556 Gastrointestinal Stromal GIST-5_KIT e9 62 17 1174 153 6 324 1059 SP2,SP2-AS1,PNPO,MRPL10,OSBPL7,LRRC46,SCRN2,SP6
SE_00_005301086 chr17:47866630-47886810 Sample_00_0053 Embryo trophoblast cell originated from H1 1086 11 594 78 3 183 525 SP6,MRPL10,OSBPL7,LRRC46,SP2,SCRN2
SE_02_019700062 chr17:47868798-47886113 Sample_02_0197 Stomach SNU1750 62 4 496 68 3 168 525 LRRC46,SCRN2,SP6,OSBPL7,MRPL10,SP2
SE_02_061400421 chr17:47872500-47930295 Sample_02_0614 Liposarcoma MLPS_T2 421 17 1469 190 10 371 1932 SP2,SP2-AS1,PNPO,PRR15L,MRPL10,LRRC46,CDK5RAP3,SP6,SCRN2
SE_02_067200629 chr17:47872584-47906892 Sample_02_0672 Endometrium endometrium cancer_DSG 629 7 921 133 6 234 959 SP2,SP2-AS1,PNPO,LRRC46,SCRN2,SP6,MRPL10
SE_02_087100252 chr17:47872602-47885694 Sample_02_0871 Colon HCT116_GLIS2.2-DMSO 252 2 374 56 3 103 525 SP6,SP2,MRPL10,LRRC46,SCRN2
SE_02_077800112 chr17:47874514-47907181 Sample_02_0778 Mammary gland MCF7_FASR 112 4 877 126 6 214 959 SP2,SP2-AS1,PNPO,LRRC46,SCRN2,SP6,MRPL10,CDK5RAP3,OSBPL7,PRR15L
SE_02_152500490 chr17:47877044-47894241 Sample_02_1525 Stomach N87 DMSO 490 5 461 76 3 127 525 PNPO,SP2,LRRC46,SCRN2,SP2-AS1,SP6,MRPL10
SE_02_008600949 chr17:47877297-47898252 Sample_02_0086 Pancreas CAPAN1 949 3 563 85 3 187 734 SP2,LRRC46,PNPO,SCRN2,SP6,MRPL10
SE_00_002200931 chr17:47877372-47907514 Sample_00_0022 Lung lung_30y 931 5 799 115 5 210 959 SP2,LRRC46,PNPO,SCRN2,SP6,MRPL10,CDK5RAP3,PRR15L
SE_01_009000783 chr17:47877520-47916312 Sample_01_0090 Lung upper-lobe-of-left-lung 783 6 979 136 8 235 1097 SP2,LRRC46,PNPO,MRPL10,PRR15L,SP6,SCRN2
SE_02_129900358 chr17:47878901-47905897 Sample_02_1299 Liver liver 358 10 732 111 4 187 959 SP2,SP2-AS1,PNPO,LRRC46,SCRN2,SP6,MRPL10
SE_02_080800557 chr17:47880983-47903016 Sample_02_0808 Ovary RMG1_ARID1A KO 557 11 587 78 2 172 692 SP2,SP2-AS1,PNPO,LRRC46,SCRN2,SP6,MRPL10
SE_02_129800213 chr17:47881636-47906877 Sample_02_1298 Hilar lymph node Hilar lymph node 213 7 647 92 3 185 588 SP2,SP2-AS1,SP6,PNPO,SCRN2
SE_02_040400116 chr17:47881688-47908403 Sample_02_0404 Mammary gland ZR-75-1_2 116 5 679 96 5 192 584 SP2,PNPO,SP6,PRR15L,SCRN2
SE_02_090000550 chr17:47881837-47930467 Sample_02_0900 Heart left ventricle_LV1452 550 15 1189 148 7 311 1535 SP2,SP2-AS1,SP6,PRR15L,SCRN2,CDK5RAP3,PNPO
SE_02_089600458 chr17:47881871-47930750 Sample_02_0896 Heart left ventricle_LV1294 458 13 1198 148 7 311 1524 SP2,SP2-AS1,SP6,PRR15L,SCRN2,CDK5RAP3,PNPO
SE_02_074800744 chr17:47881972-47929640 Sample_02_0748 Mammary gland HCC1599_WO 744 9 1165 144 7 310 1512 SP2,SP2-AS1,SP6,PRR15L,SCRN2,CDK5RAP3,PNPO
SE_02_067400581 chr17:47881982-47906244 Sample_02_0674 Endometrium E1_FA 581 5 630 90 3 183 539 SP2,SP2-AS1,SP6,PNPO,SCRN2
SE_02_088800779 chr17:47882096-47916274 Sample_02_0888 Heart left ventricle_LV1160 779 11 832 112 6 208 647 SP2,SP2-AS1,SP6,PRR15L,SCRN2,PNPO
SE_02_129600290 chr17:47882159-47905921 Sample_02_1296 Perigastric lymph node Perigastric lymph node 290 8 623 90 3 183 509 SP2,SP2-AS1,SP6,PNPO,SCRN2
SE_02_090800510 chr17:47882286-47931908 Sample_02_0908 Heart left ventricle_DCM_LV1262 510 12 1213 147 7 311 1461 SP2,SP2-AS1,SP6,PRR15L,SCRN2,CDK5RAP3,PNPO
SE_02_091000621 chr17:47882369-47930944 Sample_02_0910 Heart left ventricle_DCM_LV1275 621 11 1188 147 7 308 1451 SP2,SP2-AS1,SP6,PRR15L,SCRN2,CDK5RAP3,PNPO
SE_02_088900688 chr17:47882456-47930873 Sample_02_0889 Heart left ventricle_LV1183 688 8 1186 146 7 295 1433 SP2,SP2-AS1,SP6,PRR15L,SCRN2,CDK5RAP3,PNPO
SE_02_089200581 chr17:47882474-47930736 Sample_02_0892 Heart left ventricle_LV1215 581 15 1184 146 7 291 1432 SP2,SP2-AS1,SP6,PRR15L,SCRN2,CDK5RAP3,PNPO
SE_02_074900757 chr17:47882496-47930026 Sample_02_0749 Mammary gland HCC1599_GSI 757 13 1164 146 7 288 1424 SP2,SP2-AS1,SP6,PRR15L,SCRN2,CDK5RAP3,PNPO
SE_02_098901401 chr17:47882531-47909550 Sample_02_0989 Kidney kidney cortex_WT 1401 7 689 96 5 172 443 SP2,SP2-AS1,SP6,PRR15L,SCRN2,PNPO
SE_02_123400399 chr17:47883628-47908361 Sample_02_1234 Mammary gland T47D_Full 399 6 626 86 5 168 434 SP2,SP2-AS1,SP6,PRR15L,SCRN2,PNPO
SE_02_108600359 chr17:47883784-47908338 Sample_02_1086 Mammary gland T47D_shCtrl_0hr 359 4 624 86 5 167 434 SP2,SP2-AS1,SP6,PRR15L,SCRN2,PNPO
SE_02_108700475 chr17:47883802-47914583 Sample_02_1087 Mammary gland T47D_shCtrl_shRING1B_0 475 8 749 98 6 173 434 SP2,SP2-AS1,SP6,PRR15L,SCRN2,PNPO
SE_02_109200474 chr17:47883813-47908398 Sample_02_1092 Mammary gland T47D_shCtrl_24hr 474 6 621 86 5 164 434 SP2,SP2-AS1,SP6,PRR15L,SCRN2,PNPO
SE_02_109000418 chr17:47883822-47908094 Sample_02_1090 Mammary gland T47D_shCtrl_8hr 418 4 619 86 5 158 434 SP2,SP2-AS1,SP6,PRR15L,SCRN2,PNPO
SE_02_109300508 chr17:47884042-47908523 Sample_02_1093 Mammary gland T47D_shCtrl_shRING1B_24hr 508 6 620 86 5 163 434 SP2,SP2-AS1,SP6,PRR15L,SCRN2,PNPO
SE_02_090600360 chr17:47885422-47931078 Sample_02_0906 Heart left ventricle_DCM_LV1072 360 11 1114 136 7 256 1407 SP2,SP2-AS1,SP6,PRR15L,SCRN2,CDK5RAP3,PNPO
SE_02_146400460 chr17:47889009-47912995 Sample_02_1464 Ovary CAOV4 460 8 585 74 4 107 434 SP2,SP2-AS1,SP6,PRR15L,SCRN2,PNPO
SE_02_075601038 chr17:47892342-47905477 Sample_02_0756 Embryo ES-derived progenitors_FG FOXA2 -/- 1038 3 346 47 2 84 434 SP2,SP2-AS1,PNPO,SP6
SE_02_080900501 chr17:47893454-47908300 Sample_02_0809 Mammary gland T47D Serum 501 5 381 45 4 95 434 SP2,SP2-AS1,SP6,PNPO,PRR15L
SE_02_074701046 chr17:47893971-47915101 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 1046 9 501 58 5 98 434 SP2,SP2-AS1,SP6,PNPO,PRR15L
SE_01_008100957 chr17:47894434-47917249 Sample_01_0081 Right atrium auricular region right-atrium-auricular-region 957 4 552 66 6 144 762 SP2,PNPO,SP6,PRR15L
SE_02_127800789 chr17:47894714-47909858 Sample_02_1278 Chordoma UCH1_DMSO_48h 789 6 388 47 4 91 434 SP2,SP2-AS1,SP6,PNPO,PRR15L
SE_00_003300578 chr17:47894865-47908393 Sample_00_0033 Psoas muscle psoas-muscle_3y 578 5 350 44 4 89 434 SP2,PNPO,SP6,PRR15L
SE_02_090700713 chr17:47894949-47930474 Sample_02_0907 Heart left ventricle_DCM_LV1223 713 7 862 96 6 208 1407 SP2,SP2-AS1,PNPO,CDK5RAP3,SP6,PRR15L
SE_00_003400540 chr17:47894951-47908520 Sample_00_0034 Right cardiac atrium right-cardiac-atrium 540 6 347 43 4 89 434 SP2,PNPO,SP6,PRR15L
SE_02_091800272 chr17:47895029-47930795 Sample_02_0918 Heart left ventricle_DCM_LV1437 272 10 869 96 6 208 1407 SP2,SP2-AS1,PNPO,CDK5RAP3,SP6,PRR15L
SE_02_091600391 chr17:47896021-47930627 Sample_02_0916 Heart left ventricle_DCM_LV1392 391 15 830 92 6 199 1393 SP2,SP2-AS1,PNPO,CDK5RAP3,SP6,PRR15L
SE_02_090500790 chr17:47896034-47930633 Sample_02_0905 Heart left ventricle_DCM_LV1033 790 8 829 92 6 199 1391 SP2,SP2-AS1,PNPO,CDK5RAP3,SP6,PRR15L
SE_02_091700788 chr17:47896053-47916263 Sample_02_0917 Heart left ventricle_DCM_LV1433 788 10 469 57 5 95 542 SP2,SP2-AS1,SP6,PNPO,PRR15L
SE_02_119301322 chr17:47896061-47916819 Sample_02_1193 Brain GBM27 1322 4 485 60 6 117 660 SP2,SP2-AS1,SP6,PNPO,PRR15L
SE_02_089300788 chr17:47896080-47916546 Sample_02_0893 Heart left ventricle_LV1226 788 7 472 57 5 103 595 SP2,SP2-AS1,SP6,PNPO,PRR15L
SE_02_091200558 chr17:47896086-47931011 Sample_02_0912 Heart left ventricle_DCM_LV1300 558 8 831 93 6 198 1387 SP2,SP2-AS1,PNPO,CDK5RAP3,SP6,PRR15L
SE_02_088700793 chr17:47896109-47916041 Sample_02_0887 Heart left ventricle_LV1121 793 8 460 56 5 89 495 SP2,SP2-AS1,SP6,PNPO,PRR15L
SE_02_090400925 chr17:47896118-47930125 Sample_02_0904 Heart left ventricle_DCM_LV1028 925 8 811 92 6 196 1384 SP2,SP2-AS1,PNPO,CDK5RAP3,SP6,PRR15L
SE_02_092000508 chr17:47896124-47916592 Sample_02_0920 Heart left ventricle_DCM_LV1535 508 12 471 57 5 102 599 SP2,SP2-AS1,SP6,PNPO,PRR15L
SE_02_089700814 chr17:47896127-47930293 Sample_02_0897 Heart left ventricle_LV1325 814 8 816 92 6 195 1383 SP2,SP2-AS1,PNPO,CDK5RAP3,SP6,PRR15L
SE_02_090900322 chr17:47896129-47930742 Sample_02_0909 Heart left ventricle_DCM_LV1264 322 12 827 92 6 195 1383 SP2,SP2-AS1,PNPO,CDK5RAP3,SP6,PRR15L
SE_02_091400426 chr17:47896131-47915971 Sample_02_0914 Heart left ventricle_DCM_LV1342 426 9 456 56 5 87 478 SP2,SP2-AS1,SP6,PNPO,PRR15L
SE_02_089400759 chr17:47896135-47916448 Sample_02_0894 Heart left ventricle_LV1248 759 7 469 57 5 99 574 SP2,SP2-AS1,SP6,PNPO,PRR15L
SE_02_089100634 chr17:47896141-47929344 Sample_02_0891 Heart left ventricle_LV1202 634 10 784 88 6 193 1383 SP2,SP2-AS1,PNPO,CDK5RAP3,SP6,PRR15L
SE_02_089000628 chr17:47896145-47915823 Sample_02_0890 Heart left ventricle_LV1200 628 7 450 55 5 86 478 SP2,SP2-AS1,SP6,PNPO,PRR15L
SE_02_090300825 chr17:47896147-47930181 Sample_02_0903 Heart left ventricle_DCM_LV1009 825 9 813 92 6 194 1381 SP2,SP2-AS1,PNPO,CDK5RAP3,SP6,PRR15L
SE_02_091100489 chr17:47896163-47930092 Sample_02_0911 Heart left ventricle_DCM_LV1290 489 12 809 92 6 193 1377 SP2,SP2-AS1,PNPO,CDK5RAP3,SP6,PRR15L
SE_02_091300583 chr17:47896169-47930425 Sample_02_0913 Heart left ventricle_DCM_LV1304 583 7 817 92 6 194 1375 SP2,SP2-AS1,PNPO,CDK5RAP3,SP6,PRR15L
SE_02_091500496 chr17:47896176-47930766 Sample_02_0915 Heart left ventricle_DCM_LV1371 496 13 826 92 6 191 1373 SP2,SP2-AS1,PNPO,CDK5RAP3,SP6,PRR15L
SE_02_092500848 chr17:47896185-47916416 Sample_02_0925 Heart fetal heart_PCW17_12570 848 11 469 57 5 90 554 SP2,SP2-AS1,SP6,PNPO,PRR15L
SE_02_091900689 chr17:47897881-47930892 Sample_02_0919 Heart left ventricle_DCM_LV1532 689 13 788 88 6 150 1223 SP2,SP2-AS1,PNPO,CDK5RAP3,SP6,PRR15L
SE_02_089500776 chr17:47899203-47930109 Sample_02_0895 Heart left ventricle_LV1259 776 9 731 83 5 143 1144 SP2,SP2-AS1,PNPO,CDK5RAP3,SP6,PRR15L
SE_02_112900879 chr17:47899402-47930769 Sample_02_1129 Adipose visceral adipose_CTL_HCTR13 879 13 740 82 5 144 1125 SP2,SP2-AS1,PNPO,CDK5RAP3,SP6,PRR15L
SE_02_112800507 chr17:47904876-47930707 Sample_02_1128 Adipose visceral adipose_CTL_HCTR10 507 10 594 64 5 139 973 SP2,SP2-AS1,PNPO,CDK5RAP3,SP6,PRR15L
Genomic distribution of SEs associated with SP2
Genome Browser

The strength of the tissue affected by the gene

Expression of SP2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)