SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800744
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr17:47881972-47929640
Size: 47668
Super-enhancer rank 744
Number of SE elements: 9
ChIP density(Case|Control): 45675.4776|6249.2748
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SP2 ;
ROSE Overlap SP2 ; SP2-AS1 ;
ROSE Proximal SP6 ; PRR15L ; SCRN2 ; CDK5RAP3 ; PNPO ;
ROSE Closest SP2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SP6 ; PNPO ; PRR15L ; CDK5RAP3 ; MRPL10 ; SP2-AS1 ; LRRC46 ; SCRN2 ; OSBPL7 ; SP2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800744 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers