SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000186212
Gene: SOWAHB Gene type: protein_coding
Strand: - External links:
Genomic region: chr4:76894152-76898144 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_047800345 chr4:76579272-76640749 Sample_02_0478 Colon normal colon mucosa 345 28 1571 160 14 189 0 SHROOM3,MIR548AH,MIR4450,SOWAHB
SE_02_135400229 chr4:76585080-76640403 Sample_02_1354 Mammary gland MDA-MB-231-Erbeta_E2_TNFa 229 7 1422 151 14 177 0 SHROOM3,MIR548AH,MIR4450,SOWAHB
SE_02_103501029 chr4:76642723-76706458 Sample_02_1035 Mammary gland HCC70_Vehicle 1029 13 1399 111 10 121 163 SHROOM3,MIR548AH,SOWAHB
SE_02_124100720 chr4:76655599-76705512 Sample_02_1241 Skin MCC26_virus_negative 720 13 1076 83 9 82 163 SHROOM3,MIR548AH,SOWAHB
SE_02_049101235 chr4:76657350-76725987 Sample_02_0491 Pharyng Detroit 562-Control 1235 11 1458 113 11 105 306 SHROOM3,MIR548AH,SOWAHB
SE_02_125800168 chr4:76657437-76725944 Sample_02_1258 Liver Pancreatic cancer cells derived from liver metastasis 168 25 1455 113 11 105 306 SHROOM3,MIR548AH,SOWAHB
SE_02_071800059 chr4:76657780-76708115 Sample_02_0718 Pancreas PATU8988S_GFP_DOX 59 13 1092 86 10 81 163 SHROOM3,MIR548AH,SOWAHB
SE_02_136600740 chr4:76658563-76714148 Sample_02_1366 Pancreas BxPC3-untreated 740 17 1201 93 11 94 228 SHROOM3,MIR548AH,SOWAHB
SE_02_136700141 chr4:76658624-76726318 Sample_02_1367 Pancreas Capan1-untreated 141 22 1436 111 11 102 306 SHROOM3,MIR548AH,SOWAHB
SE_02_105500088 chr4:76659064-76724905 Sample_02_1055 Esophagus KYAE1 88 9 1400 111 11 100 306 SHROOM3,MIR548AH,SOWAHB
SE_02_047800148 chr4:76662346-76732683 Sample_02_0478 Colon normal colon mucosa 148 27 1467 113 11 112 355 SHROOM3,MIR548AH,SOWAHB
SE_02_072200128 chr4:76662978-76706670 Sample_02_0722 Pancreas PATU8988S_TP63dN_DOX 128 14 936 76 9 75 163 SHROOM3,MIR548AH,SOWAHB
SE_01_009900191 chr4:76663273-76709867 Sample_01_0099 Colon transverse colon 191 17 1000 80 9 86 163 SHROOM3,MIR548AH,SOWAHB
SE_01_010900536 chr4:76663562-76709997 Sample_01_0109 Colon transverse colon_54y 536 12 999 80 9 86 165 SHROOM3,MIR548AH,SOWAHB
SE_02_136500627 chr4:76663833-76724801 Sample_02_1365 Pancreas AsPC1-untreated 627 15 1289 104 10 100 306 SHROOM3,MIR548AH,SOWAHB
SE_02_152400396 chr4:76677036-76725497 Sample_02_1524 Lung H3122 DMSO 396 8 983 87 6 78 306 SHROOM3,MIR548AH,SOWAHB
SE_02_067201108 chr4:76677338-76705902 Sample_02_0672 Endometrium endometrium cancer_DSG 1108 8 576 55 5 53 163 SHROOM3,MIR548AH,SOWAHB
SE_02_088601828 chr4:76681221-76705894 Sample_02_0886 Skin foreskin_ p63KLF4 1828 6 496 47 5 53 163 SHROOM3,MIR548AH,SOWAHB
SE_02_101700230 chr4:76681864-76784607 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 230 29 2258 143 13 223 2182 SHROOM3,MIR548AH,SOWAHB
SE_02_081800346 chr4:76687266-76766382 Sample_02_0818 Ovary High-grade serous ovarian cancer 346 16 1741 117 13 179 1576 SHROOM3,MIR548AH,SOWAHB
SE_02_108300438 chr4:76687349-76749470 Sample_02_1083 Macula macula 438 15 1324 100 7 154 1161 SHROOM3,MIR548AH,SOWAHB
SE_00_005601206 chr4:76687693-76710364 Sample_00_0056 Sigmoid colon sigmoid colon 3y 1206 14 478 50 5 54 213 SHROOM3,MIR548AH,SOWAHB
SE_02_141000163 chr4:76687814-76784439 Sample_02_1410 Brain GSC6 163 27 2141 136 13 211 2182 SHROOM3,MIR548AH,SOWAHB
SE_02_049900027 chr4:76688324-76785208 Sample_02_0499 Fetal lung IMR90 IR Senescence 27 36 2144 137 13 211 2182 SHROOM3,SOWAHB
SE_02_066000519 chr4:76688402-76733426 Sample_02_0660 Mammary gland MCF10DCIS 519 13 904 79 7 79 355 SHROOM3,MIR548AH,SOWAHB
SE_02_123000950 chr4:76688482-76705938 Sample_02_1230 Lung PC9 950 8 351 40 5 41 163 SHROOM3,MIR548AH,SOWAHB
SE_02_151100271 chr4:76688652-76725546 Sample_02_1511 Lung H3122_untreated 271 9 750 72 6 66 306 SHROOM3,MIR548AH,SOWAHB
SE_02_155400933 chr4:76688670-76716831 Sample_02_1554 Gastrointestinal Stromal GIST-3_KIT e11 933 7 588 58 6 65 306 SHROOM3,MIR548AH,SOWAHB
SE_02_053001002 chr4:76688967-76707320 Sample_02_0530 Mammary gland MCF10A 1002 8 376 45 5 41 163 SHROOM3,MIR548AH,SOWAHB
SE_02_118500490 chr4:76689023-76754662 Sample_02_1185 Brain GBM14 490 23 1422 108 9 155 1263 SHROOM3,MIR548AH,SOWAHB
SE_02_119900799 chr4:76719632-76766551 Sample_02_1199 Brain GBM35 799 14 1080 55 7 115 1270 SHROOM3,SOWAHB
SE_02_155200274 chr4:76722541-76767688 Sample_02_1552 HMSCs hMSC ATCC SCRC-4000 274 20 1052 50 7 115 1270 SHROOM3,SOWAHB
SE_02_060600035 chr4:76722927-76784491 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 35 13 1424 68 7 145 1876 SHROOM3,SOWAHB
SE_02_157100006 chr4:76722943-76784749 Sample_02_1571 Fibroblast Fibroblast cells 6 14 1428 68 7 145 1876 SHROOM3,SOWAHB
SE_02_060500078 chr4:76722950-76784489 Sample_02_0605 Skin Skin Fibroblast_DMSO 78 14 1424 68 7 145 1876 SHROOM3,SOWAHB
SE_02_050000057 chr4:76722964-76785224 Sample_02_0500 Fetal lung IMR90_#2 57 38 1442 69 7 145 1876 SHROOM3,SOWAHB
SE_02_056900169 chr4:76723000-76786845 Sample_02_0569 Periodontal ligament mesenchymal stem cell 169 36 1485 70 8 145 1876 SHROOM3,SOWAHB
SE_02_072700127 chr4:76723076-76784426 Sample_02_0727 Fetal lung IMR90_Etoposide 127 20 1419 68 7 145 1876 SHROOM3,SOWAHB
SE_02_049800031 chr4:76723099-76784457 Sample_02_0498 Fetal lung IMR90 Senescent_1 31 37 1419 68 7 145 1876 SHROOM3,SOWAHB
SE_02_088300543 chr4:76723107-76784451 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 543 13 1419 68 7 145 1876 SHROOM3,SOWAHB
SE_02_063700047 chr4:76723116-76784393 Sample_02_0637 Fibroblast fibroblast_WT_GM07492 47 36 1419 68 7 145 1876 SHROOM3,SOWAHB
SE_02_088600465 chr4:76723136-76784482 Sample_02_0886 Skin foreskin_ p63KLF4 465 15 1418 68 7 145 1876 SHROOM3,SOWAHB
SE_02_137500148 chr4:76723140-76784409 Sample_02_1375 Pancreas Pancreatic_tumor_associated_fibroblasts_B0010A_untreated 148 36 1418 68 7 145 1876 SHROOM3,SOWAHB
SE_02_137600225 chr4:76723146-76784525 Sample_02_1376 Pancreas Pancreatic_tumor_associated_fibroblasts_B011C_untreated 225 29 1420 68 7 145 1876 SHROOM3,SOWAHB
SE_02_101500797 chr4:76723221-76784441 Sample_02_1015 Embryo H9_ Undifferentiated 797 9 1415 68 7 145 1876 SHROOM3,SOWAHB
SE_02_083900265 chr4:76723248-76764969 Sample_02_0839 Embryo hNPCs_K755R/+ 265 17 958 46 6 111 1270 SHROOM3,SOWAHB
SE_02_086900235 chr4:76723461-76765555 Sample_02_0869 Fibroblast VH10_NO_UV 235 23 972 46 7 111 1270 SHROOM3,SOWAHB
SE_02_105801072 chr4:76723559-76784293 Sample_02_1058 Bone A673_SA2 Rescue 1072 14 1408 68 7 145 1876 SHROOM3,SOWAHB
SE_02_137400618 chr4:76723560-76784448 Sample_02_1374 Pancreas Pancreatic_tumor_associated_fibroblasts_B009B_untreated 618 22 1410 68 7 145 1876 SHROOM3,SOWAHB
SE_02_137800356 chr4:76723615-76784417 Sample_02_1378 Pancreas Pancreatic_tumor_associated_fibroblasts_CAF08_untreated 356 24 1410 68 7 145 1876 SHROOM3,SOWAHB
SE_02_126600317 chr4:76723714-76784517 Sample_02_1266 Bone Im-GCT-4072_G34W-repair_WT_E3 317 10 1409 67 7 145 1876 SHROOM3,SOWAHB
SE_02_137700430 chr4:76723786-76784284 Sample_02_1377 Pancreas Pancreatic_tumor_associated_fibroblasts_BF1_untreated 430 17 1404 67 7 145 1876 SHROOM3,SOWAHB
SE_02_086700427 chr4:76725674-76785166 Sample_02_0867 Bone marrow Bone marrow derived hMSC_d0 427 28 1388 65 7 145 1876 SHROOM3,SOWAHB
SE_02_114500526 chr4:76727479-76787609 Sample_02_1145 Peripheral nerve SNF02.2_PRC2 WT 526 12 1418 64 8 145 1876 SHROOM3,SOWAHB
SE_02_053301273 chr4:76733041-76768210 Sample_02_0533 Blood vessel Circle of Willis_54y 1273 9 860 39 6 103 1221 SHROOM3,SOWAHB
SE_02_045300080 chr4:76733725-76814544 Sample_02_0453 Neuroblastoma SJNB3 80 14 2020 104 9 150 1827 SHROOM3,SOWAHB
SE_02_124100555 chr4:76735978-76784039 Sample_02_1241 Skin MCC26_virus_negative 555 16 1172 53 6 129 1827 SHROOM3,SOWAHB
SE_02_049700074 chr4:76736014-76755634 Sample_02_0497 Fetal lung IMR90_#1 74 9 514 26 2 82 1062 SHROOM3,SOWAHB
SE_02_126400225 chr4:76737402-76785128 Sample_02_1264 Bone Im-GCT-4072_G34W KO 225 8 1171 53 6 131 1827 SHROOM3,SOWAHB
SE_02_126500361 chr4:76737571-76785019 Sample_02_1265 Bone Im-GCT-4072_G34W-repair_WT_D6 361 10 1162 52 6 131 1827 SHROOM3,SOWAHB
SE_00_005300444 chr4:76743077-76782491 Sample_00_0053 Embryo trophoblast cell originated from H1 444 16 958 44 6 61 1000 SHROOM3,SOWAHB
SE_02_048101028 chr4:76743828-76785251 Sample_02_0481 Mammary gland MDA-MB231 1028 12 984 45 6 66 1065 SHROOM3,SOWAHB
SE_02_055700089 chr4:76747895-76784314 Sample_02_0557 iPSCs WT hiPSC#1 89 12 863 38 6 60 1065 SHROOM3,SOWAHB
SE_02_055600677 chr4:76748126-76782335 Sample_02_0556 iPSCs BOFS hiPSC cl1 677 7 826 38 6 55 977 SHROOM3,SOWAHB
SE_02_126900851 chr4:76752465-76784546 Sample_02_1269 Bone Im-GCT-4072_G34W-repair_WT_A4 851 3 754 32 6 57 1021 SHROOM3,SOWAHB
SE_02_136400323 chr4:76752920-76784271 Sample_02_1364 Pancreas pancreatic tumor_associated fibroblasts_triptolide_18h 323 10 742 32 6 57 1021 SHROOM3,SOWAHB
SE_02_126200616 chr4:76780651-76784373 Sample_02_1262 Bone Im-GCT-3504_G34W 616 1 74 0 0 6 272 SHROOM3,SOWAHB
SE_02_105801167 chr4:76798487-76815032 Sample_02_1058 Bone A673_SA2 Rescue 1167 9 481 46 3 17 0 SOWAHB
SE_02_156001241 chr4:76801429-76833238 Sample_02_1560 Gastrointestinal Stromal GIST-9_PDGFRA e18 1241 7 848 47 8 25 0 SOWAHB
SE_02_055700638 chr4:76801453-76813553 Sample_02_0557 iPSCs WT hiPSC#1 638 2 352 37 1 17 0 SOWAHB
SE_02_084001255 chr4:76801801-76831605 Sample_02_0840 Embryo hNPCs_R1159Q/+ 1255 4 780 46 7 22 0 SOWAHB
SE_02_083901254 chr4:76802091-76832411 Sample_02_0839 Embryo hNPCs_K755R/+ 1254 5 795 46 7 25 0 SOWAHB
SE_02_151100464 chr4:76867653-76894886 Sample_02_1511 Lung H3122_untreated 464 8 768 82 0 13 198 SOWAHB
Genomic distribution of SEs associated with SOWAHB
Genome Browser

The strength of the tissue affected by the gene

Expression of SOWAHB

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)