Gene overview
| Strategies/Algorithm: | closest_active | Ensembl ID: | ENSG00000153165 |
| Gene: | RGPD3 | Gene type: | protein_coding |
| Strand: | - | External links: |
|
| Genomic region: | chr2:106391290-106468413 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_139200599 | chr2:106478107-106522162 |
Sample_02_1392 | Peripheral blood | Mac-2A_ALK- | 599 | 11 | 1170 | 99 | 1 | 43 | 0 | RGPD3 |
| SE_02_012800339 | chr2:106480610-106514910 |
Sample_02_0128 | Haematopoietic and lymphoid tissue | ALL-SIL | 339 | 12 | 863 | 78 | 1 | 43 | 0 | RGPD3 |
| SE_02_003500201 | chr2:106480853-106515249 |
Sample_02_0035 | Peripheral blood | CUTLL1_GSI_wash | 201 | 9 | 867 | 79 | 1 | 43 | 0 | RGPD3 |
| SE_02_003400233 | chr2:106480865-106515123 |
Sample_02_0034 | Peripheral blood | CUTLL1_GSI | 233 | 10 | 863 | 79 | 1 | 43 | 0 | RGPD3 |
| SE_00_000900643 | chr2:106484389-106515249 |
Sample_00_0009 | Blood | CD8-positive-alpha-beta-T-cell | 643 | 5 | 788 | 74 | 1 | 39 | 0 | RGPD3 |
| SE_02_122600052 | chr2:106485967-106539199 |
Sample_02_1226 | Bone marrow | RPMI-8226 | 52 | 28 | 1474 | 100 | 1 | 39 | 0 | RGPD3 |
| SE_02_111900394 | chr2:106486060-106547866 |
Sample_02_1119 | Blood | KBM7 | 394 | 33 | 1726 | 116 | 1 | 39 | 0 | RGPD3 |
| SE_02_072900408 | chr2:106491860-106521487 |
Sample_02_0729 | Lymphoma | I10_Mantle cell lymphoma tissue_THZ1 | 408 | 15 | 800 | 71 | 1 | 32 | 0 | RGPD3 |
| SE_02_122100104 | chr2:106491916-106538077 |
Sample_02_1221 | Bone marrow | KMS11 | 104 | 19 | 1285 | 87 | 1 | 32 | 0 | RGPD3 |
| SE_02_072800512 | chr2:106492188-106522284 |
Sample_02_0728 | Lymphoma | I10_Mantle cell lymphoma tissue_DMSO | 512 | 13 | 822 | 72 | 1 | 32 | 0 | RGPD3 |
| SE_02_073300581 | chr2:106493165-106537890 |
Sample_02_0733 | Lymphoma | L20_Mantle cell lymphoma tissue_THZ1 | 581 | 10 | 1242 | 87 | 1 | 32 | 0 | RGPD3 |
| SE_02_073100369 | chr2:106495643-106538310 |
Sample_02_0731 | Lymphoma | J4_Mantle cell lymphoma tissue_THZ1 | 369 | 10 | 1209 | 81 | 1 | 32 | 0 | RGPD3 |
| SE_02_073000337 | chr2:106495698-106538368 |
Sample_02_0730 | Lymphoma | J4_Mantle cell lymphoma tissue_DMSO | 337 | 8 | 1210 | 81 | 1 | 32 | 0 | RGPD3 |
| SE_02_140700631 | chr2:106557921-106580427 |
Sample_02_1407 | Prostate | LNCaP_R1881 4h | 631 | 6 | 702 | 57 | 1 | 0 | 0 | RGPD3 |
Genomic distribution of SEs associated with RGPD3