SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_072800512
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Lymphoma
Biosample name: I10_Mantle cell lymphoma tissue_DMSO
Genomic region: chr2:106492188-106522284
Size: 30096
Super-enhancer rank 512
Number of SE elements: 13
ChIP density(Case|Control): 38685.3984|5721.2496
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RGPD3 ;
ROSE Overlap ;
ROSE Proximal RGPD3 ;
ROSE Closest RGPD3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA RGPD3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_072800512 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers