SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000154822
Gene: PLCL2 Gene type: protein_coding
Strand: + External links:
Genomic region: chr3:16802651-17090604 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_012500076 chr3:16656660-16699628 Sample_02_0125 Embryo Embryonic-stem-cells_Primed 76 5 1200 27 1 0 0 DAZL,PLCL2
SE_01_003100060 chr3:16657455-16673298 Sample_01_0031 Skin GM23338 60 3 448 3 1 0 0 DAZL,PLCL2
SE_00_001800188 chr3:16657672-16672865 Sample_00_0018 Dermal fibroblasts iPS-18axian 188 4 433 3 1 0 0 DAZL,PLCL2
SE_00_001300363 chr3:16657965-16671960 Sample_00_0013 Embryo H9 363 4 405 3 1 0 0 DAZL,PLCL2
SE_02_038200753 chr3:16763268-16776264 Sample_02_0382 Heart purified cardiomyocyte G296S mutants 753 2 418 4 0 0 0 PLCL2
SE_00_003100223 chr3:16781856-16806827 Sample_00_0031 Placenta placenta 223 2 678 31 2 30 97 PLCL2
SE_02_092900704 chr3:16783122-16805073 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 704 15 601 26 1 30 97 PLCL2
SE_02_093000367 chr3:16783125-16805612 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 367 18 615 27 2 30 97 PLCL2
SE_02_144000134 chr3:16785799-16804173 Sample_02_1440 Cytotrophoblast Cytotrophoblast 134 6 497 17 1 30 97 PLCL2
SE_02_075100568 chr3:16788398-16804447 Sample_02_0751 Lymphoma Rec-1_WO 568 6 443 9 1 30 97 PLCL2
SE_02_075000257 chr3:16788490-16850062 Sample_02_0750 Lymphoma Rec-1_GSI 257 18 1653 80 7 131 97 PLCL2
SE_01_002100859 chr3:16794571-16804383 Sample_01_0021 Skin bipolar-neuron 859 2 277 7 1 29 97 PLCL2
SE_02_003300045 chr3:16795888-16922426 Sample_02_0033 Pancreas pancreatic-islets-F 45 17 3191 203 13 345 284 PLCL2,MIR3714
SE_02_004700548 chr3:16796533-16855560 Sample_02_0047 Pancreatic endoderm IIDP/donor790 548 13 1574 86 7 122 97 PLCL2
SE_02_069100058 chr3:16800804-16843785 Sample_02_0691 Lung NCI-H524_no infection 58 14 1176 71 3 88 97 PLCL2
SE_02_014600268 chr3:16813939-16845295 Sample_02_0146 Bone marrow LP-1_SGC-CBP30 268 5 839 46 3 63 0 PLCL2
SE_02_122100755 chr3:16815186-16843714 Sample_02_1221 Bone marrow KMS11 755 7 761 41 0 63 0 PLCL2
SE_02_104300970 chr3:16823880-16926971 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 970 31 2484 161 11 293 187 PLCL2,MIR3714
SE_02_032000689 chr3:16836780-16850174 Sample_02_0320 Peripheral blood MO1043_ICN1_HA_H3K27Ac_a 689 3 311 7 3 58 0 PLCL2
SE_01_007600497 chr3:16836947-16920219 Sample_01_0076 Gastrocnemius medialis gastrocnemius-medialis 497 6 2003 131 9 275 187 PLCL2,MIR3714
SE_01_009400279 chr3:16837001-16930359 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 279 35 2227 142 12 284 187 PLCL2,MIR3714
SE_01_002100680 chr3:16837135-16843926 Sample_01_0021 Skin bipolar-neuron 680 1 156 2 0 30 0 PLCL2
SE_02_010400866 chr3:16841004-16851590 Sample_02_0104 Blood neutrophils 866 1 245 8 3 42 0 PLCL2
SE_02_063800625 chr3:16864307-16918269 Sample_02_0638 Fibroblast HGPS fibroblast_LMNA_AG11498 625 10 1302 87 5 197 187 PLCL2,MIR3714
SE_02_010400727 chr3:16868744-16909763 Sample_02_0104 Blood neutrophils 727 6 981 59 3 167 187 PLCL2,MIR3714
SE_02_152901093 chr3:16868770-16892512 Sample_02_1529 Peripheral blood neutrophils_0BC75 1093 5 552 41 1 125 187 PLCL2,MIR3714
SE_00_003300123 chr3:16874663-16930401 Sample_00_0033 Psoas muscle psoas-muscle_3y 123 12 1319 78 9 199 187 PLCL2,MIR3714
SE_01_009700803 chr3:16874862-16917507 Sample_01_0097 Gastrocnemius medialis gastrocnemius medialis_53y 803 12 1028 59 5 171 187 PLCL2,MIR3714
SE_02_098901810 chr3:16880899-16920826 Sample_02_0989 Kidney kidney cortex_WT 1810 16 950 47 5 167 187 PLCL2,MIR3714
SE_02_061400438 chr3:16881188-16907690 Sample_02_0614 Liposarcoma MLPS_T2 438 8 644 25 3 133 187 PLCL2,MIR3714
SE_02_038200793 chr3:16881312-16917966 Sample_02_0382 Heart purified cardiomyocyte G296S mutants 793 4 876 40 5 149 187 PLCL2,MIR3714
SE_01_008100786 chr3:16881380-16919378 Sample_01_0081 Right atrium auricular region right-atrium-auricular-region 786 4 911 45 5 159 187 PLCL2,MIR3714
SE_02_090800883 chr3:16881401-16930444 Sample_02_0908 Heart left ventricle_DCM_LV1262 883 26 1153 57 9 184 187 PLCL2,MIR3714
SE_02_089600626 chr3:16881542-16943105 Sample_02_0896 Heart left ventricle_LV1294 626 33 1496 76 9 203 234 PLCL2,MIR3714
SE_02_089800296 chr3:16881561-16950929 Sample_02_0898 Heart left ventricle_LV1356 296 27 1707 84 9 203 234 PLCL2,MIR3714
SE_02_090300529 chr3:16881597-16922399 Sample_02_0903 Heart left ventricle_DCM_LV1009 529 24 955 46 5 162 187 PLCL2,MIR3714
SE_02_089200465 chr3:16881659-16941816 Sample_02_0892 Heart left ventricle_LV1215 465 20 1454 69 9 202 234 PLCL2,MIR3714
SE_02_038100456 chr3:16881662-16918557 Sample_02_0381 Heart purified cardiomyocyte WT 456 6 886 43 5 147 187 PLCL2,MIR3714
SE_02_091800590 chr3:16881663-16917827 Sample_02_0918 Heart left ventricle_DCM_LV1437 590 17 866 39 5 143 187 PLCL2,MIR3714
SE_02_090100255 chr3:16881694-16951171 Sample_02_0901 Heart left ventricle_LV1471 255 38 1713 84 9 199 234 PLCL2,MIR3714
SE_02_091300617 chr3:16881696-16941799 Sample_02_0913 Heart left ventricle_DCM_LV1304 617 18 1453 69 9 199 234 PLCL2,MIR3714
SE_02_127300631 chr3:16881728-16908525 Sample_02_1273 Cervix HeLa 631 5 652 26 3 125 187 PLCL2,MIR3714
SE_02_091400326 chr3:16881734-16941774 Sample_02_0914 Heart left ventricle_DCM_LV1342 326 18 1449 69 9 199 234 PLCL2,MIR3714
SE_02_090400520 chr3:16881750-16941707 Sample_02_0904 Heart left ventricle_DCM_LV1028 520 17 1446 69 9 199 234 PLCL2,MIR3714
SE_00_002100153 chr3:16881763-16944432 Sample_00_0021 Lung lung_3y 153 17 1528 79 9 199 234 PLCL2,MIR3714
SE_02_091000599 chr3:16881814-16922624 Sample_02_0910 Heart left ventricle_DCM_LV1275 599 15 954 46 5 158 187 PLCL2,MIR3714
SE_02_088700471 chr3:16881814-16941404 Sample_02_0887 Heart left ventricle_LV1121 471 17 1434 69 9 199 234 PLCL2,MIR3714
SE_02_089300363 chr3:16881822-16918983 Sample_02_0893 Heart left ventricle_LV1226 363 15 892 45 5 149 187 PLCL2,MIR3714
SE_02_092500326 chr3:16881831-16917612 Sample_02_0925 Heart fetal heart_PCW17_12570 326 9 859 39 5 142 187 PLCL2,MIR3714
SE_02_090200643 chr3:16881832-16919173 Sample_02_0902 Heart left ventricle_LV1558 643 19 896 45 5 149 187 PLCL2,MIR3714
SE_02_089100386 chr3:16881845-16942262 Sample_02_0891 Heart left ventricle_LV1202 386 24 1463 73 9 199 234 PLCL2,MIR3714
SE_02_088800525 chr3:16881855-16919013 Sample_02_0888 Heart left ventricle_LV1160 525 18 893 45 5 149 187 PLCL2,MIR3714
SE_02_089700239 chr3:16881862-16950970 Sample_02_0897 Heart left ventricle_LV1325 239 23 1701 84 9 199 234 PLCL2,MIR3714
SE_01_009800545 chr3:16881863-16917774 Sample_01_0098 Heart left ventricle_51y 545 13 861 39 5 142 187 PLCL2,MIR3714
SE_02_091200527 chr3:16881882-16922357 Sample_02_0912 Heart left ventricle_DCM_LV1300 527 15 948 46 5 158 187 PLCL2,MIR3714
SE_02_092300551 chr3:16881899-16917876 Sample_02_0923 Heart fetal heart_PCW10_12522 551 8 863 40 5 142 187 PLCL2,MIR3714
SE_02_090700850 chr3:16881911-16917646 Sample_02_0907 Heart left ventricle_DCM_LV1223 850 19 860 39 5 142 187 PLCL2,MIR3714
SE_02_089400311 chr3:16881919-16917980 Sample_02_0894 Heart left ventricle_LV1248 311 16 865 40 5 143 187 PLCL2,MIR3714
SE_02_088900482 chr3:16881944-16941877 Sample_02_0889 Heart left ventricle_LV1183 482 17 1451 69 9 199 234 PLCL2,MIR3714
SE_02_090500652 chr3:16881945-16941815 Sample_02_0905 Heart left ventricle_DCM_LV1033 652 16 1448 69 9 199 234 PLCL2,MIR3714
SE_02_091600584 chr3:16881956-16917624 Sample_02_0916 Heart left ventricle_DCM_LV1392 584 17 859 39 5 142 187 PLCL2,MIR3714
SE_02_091700552 chr3:16881964-16918001 Sample_02_0917 Heart left ventricle_DCM_LV1433 552 19 864 40 5 143 187 PLCL2,MIR3714
SE_02_091100707 chr3:16881965-16917466 Sample_02_0911 Heart left ventricle_DCM_LV1290 707 21 854 38 5 142 187 PLCL2,MIR3714
SE_02_090600756 chr3:16881968-16917605 Sample_02_0906 Heart left ventricle_DCM_LV1072 756 15 858 39 5 142 187 PLCL2,MIR3714
SE_02_090000532 chr3:16881969-16941997 Sample_02_0900 Heart left ventricle_LV1452 532 20 1457 72 9 199 234 PLCL2,MIR3714
SE_02_092000639 chr3:16881979-16917554 Sample_02_0920 Heart left ventricle_DCM_LV1535 639 20 855 38 5 142 187 PLCL2,MIR3714
SE_02_092200273 chr3:16881982-16944457 Sample_02_0922 Heart fetal heart_PCW10_12434 273 16 1525 79 9 199 234 PLCL2,MIR3714
SE_02_090901012 chr3:16881986-16908650 Sample_02_0909 Heart left ventricle_DCM_LV1264 1012 13 650 26 3 125 187 PLCL2,MIR3714
SE_02_089000648 chr3:16881990-16917607 Sample_02_0890 Heart left ventricle_LV1200 648 17 858 39 5 142 187 PLCL2,MIR3714
SE_00_004600656 chr3:16881997-16910500 Sample_00_0046 Heart right ventricle_34y 656 14 694 29 3 125 187 PLCL2,MIR3714
SE_02_004700714 chr3:16882036-16923689 Sample_02_0047 Pancreatic endoderm IIDP/donor790 714 17 968 48 6 161 187 PLCL2,MIR3714
SE_00_003401029 chr3:16882052-16917960 Sample_00_0034 Right cardiac atrium right-cardiac-atrium 1029 11 861 40 5 143 187 PLCL2,MIR3714
SE_00_005200264 chr3:16882057-16946257 Sample_00_0052 Heart left ventricle 3y 264 40 1579 81 9 199 234 PLCL2,MIR3714
SE_02_092400647 chr3:16882136-16916500 Sample_02_0924 Heart fetal heart_PCW10_12569 647 9 817 33 4 139 187 PLCL2,MIR3714
SE_02_074701014 chr3:16882195-16911059 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 1014 20 705 29 3 125 187 PLCL2,MIR3714
SE_00_005700399 chr3:16882198-16917682 Sample_00_0057 Heart right ventricle 3y 399 20 851 39 5 142 187 PLCL2,MIR3714
SE_02_058900770 chr3:16882205-16907617 Sample_02_0589 Cervix HeLa Kyoto_Luci siRNA 770 6 617 25 3 125 187 PLCL2,MIR3714
SE_02_092100516 chr3:16882219-16917504 Sample_02_0921 Heart embryonic heart_CS22 516 16 844 38 5 142 187 PLCL2,MIR3714
SE_02_055500178 chr3:16882451-16905365 Sample_02_0555 Other HAP1_WT 178 5 553 21 3 111 187 PLCL2,MIR3714
SE_02_091900662 chr3:16882574-16917858 Sample_02_0919 Heart left ventricle_DCM_LV1532 662 17 844 39 5 138 187 PLCL2,MIR3714
SE_02_089900833 chr3:16882748-16917694 Sample_02_0899 Heart left ventricle_LV1400 833 13 837 38 5 138 187 PLCL2,MIR3714
SE_00_003901190 chr3:16883179-16897882 Sample_00_0039 Spleen spleen_3y 1190 4 344 7 1 97 187 PLCL2,MIR3714
SE_02_044500762 chr3:16883468-16942962 Sample_02_0445 Lung lung metastasis from primary osteosarcoma tumor M10 762 26 1446 72 8 191 234 PLCL2,MIR3714
SE_01_002000740 chr3:16883716-16916739 Sample_01_0020 Blood B-cell 740 8 786 30 3 131 187 PLCL2,MIR3714
SE_02_078200381 chr3:16883759-16930189 Sample_02_0782 Blood MEC1 381 11 1092 53 7 158 187 PLCL2,MIR3714
SE_02_075000520 chr3:16883855-16928706 Sample_02_0750 Lymphoma Rec-1_GSI 520 21 1030 50 6 158 187 PLCL2,MIR3714
SE_02_032100190 chr3:16883885-16950298 Sample_02_0321 Peripheral blood MO1043_ICN1_HA_H3K27Ac_b 190 8 1636 80 8 191 234 PLCL2,MIR3714
SE_02_078300923 chr3:16883889-16929475 Sample_02_0783 Blood MEC2 923 9 1070 52 7 158 187 PLCL2,MIR3714
SE_02_075100467 chr3:16883987-16929478 Sample_02_0751 Lymphoma Rec-1_WO 467 24 1069 52 7 158 187 PLCL2,MIR3714
SE_02_014800589 chr3:16883990-16904766 Sample_02_0148 Blood CD8_T_cells 589 4 507 18 2 106 187 PLCL2,MIR3714
SE_02_021300776 chr3:16884011-16917929 Sample_02_0213 Burkitts lymphoma of the left maxilla Raji_JQ1 776 6 811 36 4 133 187 PLCL2,MIR3714
SE_02_078400546 chr3:16884028-16918303 Sample_02_0784 Blood OSU-CLL 546 11 823 39 4 133 187 PLCL2,MIR3714
SE_02_032000176 chr3:16884055-16952304 Sample_02_0320 Peripheral blood MO1043_ICN1_HA_H3K27Ac_a 176 8 1680 80 8 189 234 PLCL2,MIR3714
SE_02_070300582 chr3:16884140-16921413 Sample_02_0703 Pancreas PATU8988S WT 582 9 884 42 4 147 187 PLCL2,MIR3714
SE_02_073400385 chr3:16884145-16929904 Sample_02_0734 Lymphoma PAR_Mantle cell lymphoma tissue_DMSO 385 13 1082 53 7 156 187 PLCL2,MIR3714
SE_02_073500426 chr3:16884199-16930132 Sample_02_0735 Lymphoma PAR_Mantle cell lymphoma tissue_THZ1 426 9 1086 53 7 156 187 PLCL2,MIR3714
SE_02_073300511 chr3:16884215-16929755 Sample_02_0733 Lymphoma L20_Mantle cell lymphoma tissue_THZ1 511 12 1076 52 7 156 187 PLCL2,MIR3714
SE_02_121800293 chr3:16884228-16913514 Sample_02_1218 Bone marrow Daudi 293 21 720 26 2 118 187 PLCL2,MIR3714
SE_02_012000332 chr3:16884229-16914685 Sample_02_0120 Haematopoietic and lymphoid tissue REC-1 332 5 741 27 3 123 187 PLCL2,MIR3714
SE_02_073200504 chr3:16884252-16930013 Sample_02_0732 Lymphoma L20_Mantle cell lymphoma tissue_DMSO 504 9 1083 53 7 156 187 PLCL2,MIR3714
SE_02_142900676 chr3:16884304-16929976 Sample_02_1429 Blood GM12878_WT 676 12 1080 53 7 156 187 PLCL2,MIR3714
SE_02_023200476 chr3:16885111-16938602 Sample_02_0232 Tonsil ILC3 476 12 1291 63 8 168 165 PLCL2,MIR3714
SE_02_023400703 chr3:16885112-16951831 Sample_02_0234 Tonsil Th17 703 17 1655 80 8 168 165 PLCL2,MIR3714
SE_02_014600204 chr3:16885185-16915838 Sample_02_0146 Bone marrow LP-1_SGC-CBP30 204 6 735 27 3 104 95 PLCL2,MIR3714
SE_02_023100170 chr3:16885292-16944196 Sample_02_0231 Tonsil ILC1 170 12 1440 75 8 155 113 PLCL2,MIR3714
SE_02_127100626 chr3:16886917-16919556 Sample_02_1271 Leiomyosarcoma SK-LMS-1_WT 626 14 779 40 4 90 0 PLCL2,MIR3714
SE_02_104602006 chr3:17128466-17170231 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 2006 15 1301 18 2 26 715 TBC1D5,MIR3714,PLCL2
SE_02_104801888 chr3:17151535-17170068 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 1888 6 531 11 0 26 715 TBC1D5,MIR3714,PLCL2
SE_02_053301229 chr3:17157386-17208835 Sample_02_0533 Blood vessel Circle of Willis_54y 1229 17 1341 36 2 102 745 TBC1D5,MIR3714,PLCL2
Genomic distribution of SEs associated with PLCL2
Genome Browser

The strength of the tissue affected by the gene

Expression of PLCL2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)