SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000199031
Gene: MIR371A Gene type: miRNA
Strand: + External links:
Genomic region: chr19:53787675-53787741 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_074400457 chr19:53769032-53781448 Sample_02_0744 Embryo ES derived cardiac mesoderm_day5 457 9 445 29 0 0 0 MIR517C,MIR516B2,MIR518A2,MIR519A1,MIR526A2,MIR516B1,NLRP12,MIR1283-2,MIR516A1,MIR371A,MIR521-1,MIR518D,MIR371B,MIR520D,MIR373,MIR527,MIR519A2,MIR522,MIR516A2,MIR518E,MIR520H,MIR372,MIR517B,MIR520G,MIR518A1
SE_02_143400192 chr19:53777706-53793088 Sample_02_1434 Trophoblast trophoblast stem cells 192 1 628 19 1 0 173 MIR371B,MIR371A,MIR373,MIR372,MIR517C,MIR527,NLRP12,MIR518A2,MIR1283-2,MIR518A1,MIR516A1,MIR518D,MIR522,MIR519A2,MIR521-1,MIR516A2,MIR516B1,MIR518E,MIR519A1,MIR520H
SE_02_143500215 chr19:53778293-53792160 Sample_02_1435 Trophoblast trophoblast stem cells_MSX2_KD 215 1 558 11 1 0 173 MIR371B,MIR371A,MIR373,MIR372,MIR517C,MIR527,NLRP12,MIR518A2,MIR1283-2,MIR518A1,MIR516A1,MIR518D,MIR522,MIR519A2,MIR521-1,MIR516A2,MIR516B1,MIR518E,MIR519A1,MIR520H
SE_02_157200883 chr19:53780989-53786260 Sample_02_1572 iPSCs FiPSC 883 1 186 2 1 0 0 MIR517C,MIR373,MIR527,NLRP12,MIR518A2,MIR372,MIR1283-2,MIR516A1,MIR518D,MIR522,MIR519A2,MIR521-1,MIR516A2,MIR516B1,MIR371A,MIR518A1,MIR371B,MIR519A1,MIR520H
SE_02_156701223 chr19:53781214-53786226 Sample_02_1567 iPSCs CiPSC 1223 1 175 2 1 0 0 MIR517C,MIR373,MIR527,NLRP12,MIR518A2,MIR372,MIR1283-2,MIR516A1,MIR518D,MIR522,MIR519A2,MIR521-1,MIR516A2,MIR516B1,MIR371A,MIR519A1,MIR371B,MIR520H
SE_02_157001003 chr19:53781221-53786084 Sample_02_1570 iPSCs EiPSC 1003 1 170 2 1 0 0 MIR517C,MIR373,MIR527,NLRP12,MIR518A2,MIR372,MIR1283-2,MIR516A1,MIR518D,MIR522,MIR519A2,MIR521-1,MIR516A2,MIR516B1,MIR371A,MIR519A1,MIR371B,MIR520H
Genomic distribution of SEs associated with MIR371A
Genome Browser

The strength of the tissue affected by the gene

Expression of MIR371A

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)