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Super-enhancer overview

SE ID: SE_02_143500215
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Trophoblast
Biosample name: trophoblast stem cells_MSX2_KD
Genomic region: chr19:53778293-53792160
Size: 13867
Super-enhancer rank 215
Number of SE elements: 1
ChIP density(Case|Control): 18992.2432|2016.2618
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR371A;
ROSE Overlap MIR371B; MIR371A; MIR373; MIR372;
ROSE Proximal MIR517C; MIR527; NLRP12; MIR518A2; MIR1283-2; MIR518A1; MIR516A1; MIR518D; MIR522; MIR519A2; MIR521-1; MIR516A2; MIR516B1; MIR518E; MIR519A1; MIR520H;
ROSE Closest MIR371A;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_143500215 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers