SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000164654
Gene: MIOS Gene type: protein_coding
Strand: + External links:
Genomic region: chr7:7566875-7608932 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_040200116 chr7:7539930-7587423 Sample_02_0402 Mammary gland SUM159PT-ZR-75-1 116 5 1413 160 1 153 448 MIOS,COL28A1
SE_02_028000403 chr7:7540071-7569853 Sample_02_0280 Mammary gland SUM159_DMSO_24h 403 3 873 88 1 43 212 MIOS,COL28A1
SE_02_041900917 chr7:7540517-7564947 Sample_02_0419 Pectoralis major muscle LHCN-M2_nodox 917 10 699 61 1 15 0 COL28A1,MIOS
SE_02_040100546 chr7:7541422-7571259 Sample_02_0401 Mammary gland SUM159PT-T47D 546 5 891 95 1 42 212 MIOS,COL28A1
SE_02_039900373 chr7:7541444-7571986 Sample_02_0399 Mammary gland SUM159PT-BT-474 373 3 919 97 1 43 212 MIOS,COL28A1
SE_02_017000506 chr7:7552890-7590242 Sample_02_0170 Prostate LNCaP_R1881_DOX 506 6 1161 149 2 151 488 MIOS,COL28A1
SE_02_066900472 chr7:7553155-7585822 Sample_02_0669 Prostate prostate cancer_DSG 472 11 1026 122 1 139 440 LOC101927391,MIOS,COL28A1
SE_02_129900542 chr7:7553190-7590444 Sample_02_1299 Liver liver 542 17 1153 144 2 152 488 LOC101927391,MIOS,COL28A1
SE_02_007200067 chr7:7553251-7570260 Sample_02_0072 Lung NCI-H82_DMSO 67 5 538 62 1 31 212 MIOS,COL28A1
SE_02_069400192 chr7:7553572-7581875 Sample_02_0694 Lung NCI-H82_no infection 192 5 910 110 1 110 356 LOC101927391,MIOS,COL28A1
SE_02_067300488 chr7:7554916-7586053 Sample_02_0673 Prostate LNCAP_FA 488 6 989 120 1 139 448 LOC101927391,MIOS,COL28A1
SE_01_006800386 chr7:7562666-7586284 Sample_01_0068 Prostate: derived from metastatic site: vertebral metastasis VCaP 386 3 754 98 1 139 448 MIOS,COL28A1
SE_02_092900881 chr7:7562871-7581870 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 881 5 625 85 1 110 356 LOC101927391,MIOS,COL28A1
SE_01_002000679 chr7:7565633-7573837 Sample_01_0020 Blood B-cell 679 1 268 34 0 93 329 MIOS,COL28A1
SE_02_078200727 chr7:7566281-7570989 Sample_02_0782 Blood MEC1 727 2 163 24 0 28 212 MIOS,COL28A1,LOC101927391
SE_01_011100458 chr7:7582633-7624298 Sample_01_0111 Brain SK-N-SH 458 16 1390 208 2 112 296 MIOS,COL28A1,LOC101927391,UMAD1
Genomic distribution of SEs associated with MIOS
Genome Browser

The strength of the tissue affected by the gene

Expression of MIOS

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)