SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000196365
Gene: LONP1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr19:5691834-5720572 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_158401450 chr19:5703254-5721162 Sample_02_1584 Brain U87 GBM_Mock 1450 4 627 35 0 67 1091 LONP1,CATSPERD,C19ORF70,RPL36,HSD11B1L
SE_02_146600289 chr19:5708612-5721238 Sample_02_1466 Blood HUDEP-2_BCL11AKO 289 3 413 19 0 51 612 LONP1,CATSPERD,C19ORF70,RPL36,HSD11B1L
SE_01_010600505 chr19:5709166-5720975 Sample_01_0106 Adrenal gland adrenal gland 54y 505 2 371 17 0 51 603 LONP1,CATSPERD,C19ORF70,RPL36,HSD11B1L
SE_02_055500231 chr19:5715565-5721123 Sample_02_0555 Other HAP1_WT 231 2 177 7 0 38 300 LONP1,CATSPERD,C19ORF70,RPL36,HSD11B1L
SE_00_000301259 chr19:5716271-5721415 Sample_00_0003 Adrenal gland adrenal-gland_97d 1259 1 176 7 0 38 300 LONP1,TMEM146,RPL36,HSD11B1L,C19ORF70
SE_02_122301112 chr19:5716419-5720167 Sample_02_1223 Bone marrow KMS28BM 1112 2 112 7 0 30 148 LONP1,C19ORF70,RPL36,CATSPERD,HSD11B1L
SE_02_054500883 chr19:5716649-5721216 Sample_02_0545 Bone marrow K562 WT 883 2 160 7 0 38 300 LONP1,CATSPERD,C19ORF70,RPL36,HSD11B1L
SE_02_061500510 chr19:5716717-5721403 Sample_02_0615 Liposarcoma liposarcoma cells_MLS402 510 1 162 7 0 38 300 LONP1,CATSPERD,C19ORF70,RPL36,HSD11B1L
SE_02_145100592 chr19:5716722-5721255 Sample_02_1451 Arter pulmonary arterial smooth muscle cells_PAH1_sictrl 592 2 158 7 0 38 300 LONP1,CATSPERD,C19ORF70,RPL36,HSD11B1L
SE_01_003900375 chr19:5716944-5721070 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 375 1 138 7 0 38 300 LONP1,TMEM146,RPL36,HSD11B1L,C19ORF70,DUS3L,FUT5,NDUFA11,SAFB,SAFB2,VAC
SE_02_145200529 chr19:5716978-5720976 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 529 2 129 7 0 38 291 LONP1,CATSPERD,C19ORF70,RPL36,HSD11B1L
SE_02_051100450 chr19:5717127-5721023 Sample_02_0511 Prostate LNCaP95_shARv7_ETOH 450 1 126 5 0 38 300 LONP1,CATSPERD,C19ORF70,RPL36,HSD11B1L
SE_02_122700585 chr19:5717228-5721485 Sample_02_1227 Bone marrow U266 585 1 142 5 0 38 300 LONP1,CATSPERD,C19ORF70,RPL36,HSD11B1L
SE_01_004100963 chr19:5717239-5721108 Sample_01_0041 Skin keratinocyte 963 1 129 5 0 38 300 LONP1,TMEM146,RPL36,HSD11B1L,C19ORF70
SE_02_039601716 chr19:5717259-5721609 Sample_02_0396 Skin NHEK-D 1716 1 145 5 0 38 300 LONP1,TMEM146,RPL36,HSD11B1L,C19ORF70
SE_02_046100289 chr19:5717394-5721118 Sample_02_0461 Blood MV-4-11-B cells 289 1 125 5 0 38 300 LONP1,CATSPERD,C19ORF70,RPL36,HSD11B1L
SE_02_050900379 chr19:5717430-5720982 Sample_02_0509 Prostate LNCaP95_shGFP_ETOH 379 1 118 5 0 38 292 LONP1,CATSPERD,C19ORF70,RPL36,HSD11B1L
SE_02_051000302 chr19:5717475-5720953 Sample_02_0510 Prostate LNCaP95_shGFP_DHT 302 1 115 5 0 38 288 LONP1,CATSPERD,C19ORF70,RPL36,HSD11B1L
SE_02_147200890 chr19:5717534-5721248 Sample_02_1472 Fetal lung IMR-90 890 1 132 5 0 38 300 LONP1,CATSPERD,C19ORF70,RPL36,HSD11B1L
SE_02_068500368 chr19:5717552-5721062 Sample_02_0685 Lung NCI-H1048_no infection 368 1 122 5 0 38 300 LONP1,CATSPERD,C19ORF70,RPL36,HSD11B1L
SE_02_108000904 chr19:5717554-5720200 Sample_02_1080 Muscle JR1 shCtrl 904 1 75 5 0 34 149 LONP1,C19ORF70,RPL36,CATSPERD,HSD11B1L
SE_02_135301027 chr19:5717581-5720597 Sample_02_1353 Mammary gland MDA-MB-231-Erbeta_TNFa 1027 1 98 5 0 36 215 LONP1,C19ORF70,RPL36,CATSPERD,HSD11B1L
SE_02_140500269 chr19:5717644-5721865 Sample_02_1405 Embryonic kidney HEK293_siBAHD1_W667G_mutant 269 1 140 5 0 38 300 LONP1,CATSPERD,C19ORF70,RPL36,HSD11B1L
SE_02_136300451 chr19:5717683-5721207 Sample_02_1363 Blood Hudep2 451 1 126 5 0 38 300 LONP1,CATSPERD,C19ORF70,RPL36,HSD11B1L
SE_02_111400338 chr19:5717737-5721256 Sample_02_1114 Embryonic kidney HEK293 338 2 127 4 0 38 300 LONP1,CATSPERD,C19ORF70,RPL36,HSD11B1L
SE_02_102800466 chr19:5717832-5721068 Sample_02_1028 Blood HL-60_WT 466 1 115 4 0 38 300 LONP1,CATSPERD,C19ORF70,RPL36,HSD11B1L
SE_02_051200141 chr19:5717869-5720687 Sample_02_0512 Prostate LNCaP95_shARv7_DHT 141 1 94 4 0 36 230 LONP1,CATSPERD,C19ORF70,RPL36,HSD11B1L
SE_02_140400224 chr19:5717869-5721525 Sample_02_1404 Embryonic kidney HEK293_siBAHD1_WT 224 1 129 4 0 38 300 LONP1,CATSPERD,C19ORF70,RPL36,HSD11B1L
SE_02_084900582 chr19:5717871-5720106 Sample_02_0849 iPSCs iPSC_CBP-30 582 1 65 4 0 27 134 LONP1,C19ORF70,RPL36,CATSPERD,HSD11B1L
SE_02_145500620 chr19:5717969-5720994 Sample_02_1455 Arter pulmonary arterial smooth muscle cells_PAH2_sialdh1a3 620 1 104 4 0 38 298 LONP1,CATSPERD,C19ORF70,RPL36,HSD11B1L
SE_02_126900824 chr19:5718026-5721296 Sample_02_1269 Bone Im-GCT-4072_G34W-repair_WT_A4 824 1 120 4 0 38 300 LONP1,CATSPERD,C19ORF70,RPL36,HSD11B1L
SE_02_101900220 chr19:5718029-5720197 Sample_02_1019 Umbilical cord HUDEP2_Day 220 1 64 4 0 31 149 LONP1,C19ORF70,RPL36,CATSPERD,HSD11B1L
SE_02_132201381 chr19:5718075-5721191 Sample_02_1322 Connective Tissue HT1080_WT 1381 1 112 1 0 38 300 LONP1,CATSPERD,C19ORF70,RPL36,HSD11B1L
SE_02_097400427 chr19:5718110-5721425 Sample_02_0974 Brain H3.3K27M-KO_DIPGXIII-C14-nKO-Rx_PARENTAL_cells 427 1 119 1 0 38 300 LONP1,CATSPERD,C19ORF70,RPL36,HSD11B1L
Genomic distribution of SEs associated with LONP1
Genome Browser

The strength of the tissue affected by the gene

Expression of LONP1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)