SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000105438
Gene: KDELR1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr19:48382575-48391551 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_123900084 chr19:48367211-48398415 Sample_02_1239 Skin Waga_virus_positive 84 5 842 70 0 155 1451 KDELR1,SYNGR4,GRIN2D,EMP3,CCDC114,GRWD1,TMEM143
SE_02_122100198 chr19:48372499-48400676 Sample_02_1221 Bone marrow KMS11 198 9 742 59 0 182 1632 KDELR1,SYNGR4,GRIN2D,EMP3,GRWD1,TMEM143
SE_02_121900125 chr19:48372931-48398732 Sample_02_1219 Bone marrow H929 125 10 690 58 0 170 1542 KDELR1,SYNGR4,GRIN2D,EMP3,GRWD1,TMEM143
SE_02_122700208 chr19:48373737-48401314 Sample_02_1227 Bone marrow U266 208 15 720 58 0 179 1554 KDELR1,SYNGR4,GRIN2D,EMP3,GRWD1,TMEM143
SE_02_104301607 chr19:48377604-48398764 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1607 5 538 49 0 162 1165 KDELR1,GRIN2D,GRWD1,SYNGR4,TMEM143
SE_02_035200487 chr19:48378139-48401101 Sample_02_0352 Colon HCT116 487 6 579 49 0 174 1253 KDELR1,GRIN2D,GRWD1,TMEM143,SYNGR4
SE_02_082700818 chr19:48378857-48397384 Sample_02_0827 Stomach normal gastric 818 3 494 44 0 131 1013 KDELR1,GRIN2D,GRWD1,SYNGR4,TMEM143
SE_02_122400751 chr19:48379001-48399204 Sample_02_1224 Bone marrow normal plasma cell 751 9 509 47 0 172 1253 KDELR1,GRIN2D,GRWD1,SYNGR4,TMEM143
SE_02_003601429 chr19:48398116-48407866 Sample_02_0036 Embryo H7 1429 5 213 18 0 75 441 GRIN2D,TMEM143,GRWD1,KDELR1,SYNGR4,KCNJ14
SE_02_074200131 chr19:48398227-48425436 Sample_02_0742 Embryo ESCs_day0 131 8 679 60 0 143 1209 GRIN2D,KDELR1,CYTH2,SYNGR4,GRWD1,KCNJ14,TMEM143
SE_02_116000493 chr19:48398257-48425462 Sample_02_1160 Embryo H1_shLuc 493 7 680 61 0 143 1201 GRIN2D,KDELR1,CYTH2,SYNGR4,GRWD1,KCNJ14,TMEM143
SE_02_157200572 chr19:48398275-48428755 Sample_02_1572 iPSCs FiPSC 572 8 767 70 0 143 1197 GRIN2D,KDELR1,CYTH2,SYNGR4,GRWD1,KCNJ14,TMEM143
SE_02_156701059 chr19:48398477-48425220 Sample_02_1567 iPSCs CiPSC 1059 7 670 59 0 133 1133 GRIN2D,KDELR1,CYTH2,SYNGR4,GRWD1,KCNJ14,TMEM143
SE_01_003300371 chr19:48398836-48425533 Sample_01_0033 Embryo H9 371 3 675 61 0 108 1053 GRIN2D,CYTH2,SYNGR4,GRWD1,KCNJ14,KDELR1,TMEM143
Genomic distribution of SEs associated with KDELR1
Genome Browser

The strength of the tissue affected by the gene

Expression of KDELR1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)