SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_082700818
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Stomach
Biosample name: normal gastric
Genomic region: chr19:48378857-48397384
Size: 18527
Super-enhancer rank 818
Number of SE elements: 3
ChIP density(Case|Control): 6102.7938|1813.7933
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KDELR1 ;
ROSE Overlap KDELR1 ; GRIN2D ;
ROSE Proximal GRWD1 ; SYNGR4 ; TMEM143 ;
ROSE Closest KDELR1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TMEM143 ; GRWD1 ; CYTH2 ; SYNGR4 ; CCDC114 ; GRIN2D ; KDELR1 ; EMP3 ; KCNJ14 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_082700818 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers