Gene overview
| Strategies/Algorithm: | closest_active | Ensembl ID: | ENSG00000006652 |
| Gene: | IFRD1 | Gene type: | protein_coding |
| Strand: | + | External links: |
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| Genomic region: | chr7:112422887-112481017 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_01_006800224 | chr7:112390960-112392974 |
Sample_01_0068 | Prostate: derived from metastatic site: vertebral metastasis | VCaP | 224 | 1 | 39 | 2 | 0 | 1 | 0 | IFRD1 |
| SE_02_124400373 | chr7:112391216-112392230 |
Sample_02_1244 | Brain | KCNR_ATRA | 373 | 1 | 17 | 1 | 0 | 1 | 0 | IFRD1 |
| SE_02_103602623 | chr7:112391238-112393057 |
Sample_02_1036 | Mammary gland | HCC70_XY018 | 2623 | 3 | 38 | 2 | 0 | 1 | 0 | IFRD1 |
| SE_02_092700194 | chr7:112411707-112451991 |
Sample_02_0927 | Peripheral blood | neutrophils_US | 194 | 15 | 1024 | 71 | 8 | 8 | 234 | IFRD1,LSMEM1 |
| SE_00_001000880 | chr7:112419480-112435759 |
Sample_00_0010 | Embryo | endodermal-cell | 880 | 2 | 362 | 25 | 7 | 0 | 84 | IFRD1,C7ORF53 |
| SE_02_010400301 | chr7:112420205-112463223 |
Sample_02_0104 | Blood | neutrophils | 301 | 8 | 1096 | 102 | 12 | 0 | 584 | IFRD1,C7ORF53 |
| SE_02_152900459 | chr7:112420526-112452571 |
Sample_02_1529 | Peripheral blood | neutrophils_0BC75 | 459 | 8 | 832 | 60 | 8 | 0 | 301 | IFRD1,LSMEM1 |
| SE_02_126501087 | chr7:112434297-112454816 |
Sample_02_1265 | Bone | Im-GCT-4072_G34W-repair_WT_D6 | 1087 | 3 | 553 | 46 | 4 | 0 | 236 | IFRD1,LSMEM1 |
| SE_02_126401425 | chr7:112434455-112454564 |
Sample_02_1264 | Bone | Im-GCT-4072_G34W KO | 1425 | 2 | 544 | 45 | 3 | 0 | 236 | IFRD1,LSMEM1 |
| SE_01_007600445 | chr7:112436341-112488689 |
Sample_01_0076 | Gastrocnemius medialis | gastrocnemius-medialis | 445 | 4 | 1407 | 191 | 6 | 0 | 1165 | IFRD1,C7ORF53 |
| SE_02_153001009 | chr7:112443232-112462153 |
Sample_02_1530 | Peripheral blood | neutrophils_0BA0X | 1009 | 2 | 538 | 62 | 3 | 0 | 461 | IFRD1,LSMEM1 |
| SE_01_007100545 | chr7:112445169-112452790 |
Sample_01_0071 | Pancreas | body-of-pancreas | 545 | 2 | 243 | 21 | 1 | 0 | 236 | IFRD1,C7ORF53 |
| SE_01_010100525 | chr7:112445333-112463159 |
Sample_01_0101 | Pancreas | pancreas_54y | 525 | 6 | 468 | 61 | 5 | 0 | 500 | IFRD1,LSMEM1 |
| SE_02_023600616 | chr7:112445932-112452458 |
Sample_02_0236 | Colon | V206 | 616 | 3 | 191 | 16 | 1 | 0 | 211 | IFRD1,C7ORF53 |
| SE_02_074900178 | chr7:112446591-112485994 |
Sample_02_0749 | Mammary gland | HCC1599_GSI | 178 | 8 | 1032 | 163 | 5 | 0 | 1049 | IFRD1,LSMEM1 |
| SE_02_020500163 | chr7:112446749-112453373 |
Sample_02_0205 | Stomach | Gastric_Primary_Sample_T | 163 | 1 | 189 | 18 | 1 | 0 | 236 | IFRD1,C7ORF53 |
| SE_01_010401042 | chr7:112447435-112463267 |
Sample_01_0104 | Lung | upper lobe of left lung | 1042 | 5 | 404 | 54 | 4 | 0 | 500 | IFRD1,LSMEM1 |
| SE_01_010300388 | chr7:112447464-112463009 |
Sample_01_0103 | Pancreas | pancreas_37y | 388 | 4 | 398 | 54 | 4 | 0 | 500 | IFRD1,LSMEM1 |
| SE_00_002001411 | chr7:112448089-112453365 |
Sample_00_0020 | Large intestine | large-intestine_108d | 1411 | 1 | 153 | 16 | 1 | 0 | 236 | IFRD1,C7ORF53 |
| SE_00_003601144 | chr7:112448099-112453224 |
Sample_00_0036 | Small intestine | small-intestine_108days | 1144 | 1 | 152 | 16 | 1 | 0 | 236 | IFRD1,C7ORF53 |
| SE_02_088400856 | chr7:112448181-112452627 |
Sample_02_0884 | Colon | LoVo | 856 | 1 | 132 | 12 | 0 | 0 | 219 | IFRD1,LSMEM1 |
| SE_01_003700826 | chr7:112448232-112454503 |
Sample_01_0037 | Liver | hepatocyte | 826 | 1 | 170 | 17 | 1 | 0 | 236 | IFRD1,C7ORF53 |
| SE_02_032500841 | chr7:112448413-112462716 |
Sample_02_0325 | Liver | hepatocytes_d1 | 841 | 2 | 375 | 51 | 3 | 0 | 500 | IFRD1,C7ORF53 |
| SE_02_136500823 | chr7:112448451-112452708 |
Sample_02_1365 | Pancreas | AsPC1-untreated | 823 | 1 | 131 | 13 | 0 | 0 | 236 | IFRD1,LSMEM1 |
| SE_02_055400028 | chr7:112448474-112466964 |
Sample_02_0554 | Other | Aska shSSX | 28 | 10 | 488 | 76 | 4 | 0 | 500 | IFRD1,LSMEM1 |
| SE_02_032700738 | chr7:112448521-112462693 |
Sample_02_0327 | Liver | hepatocytes_d6 | 738 | 2 | 369 | 51 | 3 | 0 | 500 | IFRD1,C7ORF53 |
| SE_02_032600532 | chr7:112448775-112462855 |
Sample_02_0326 | Liver | hepatocytes_d3 | 532 | 3 | 369 | 52 | 3 | 0 | 500 | IFRD1,C7ORF53 |
| SE_02_003200935 | chr7:112449365-112452835 |
Sample_02_0032 | Pancreas | pancreatic-islets-M | 935 | 1 | 122 | 14 | 1 | 0 | 236 | IFRD1,C7ORF53 |
| SE_02_055000114 | chr7:112449392-112453963 |
Sample_02_0550 | Other | Aska-BAF47KO1 shCt | 114 | 1 | 144 | 15 | 1 | 0 | 236 | IFRD1,LSMEM1 |
| SE_02_093700704 | chr7:112449549-112463247 |
Sample_02_0937 | Retinal Pigmented Epithelial | RPE190_Con | 704 | 5 | 368 | 52 | 4 | 0 | 500 | IFRD1,LSMEM1 |
| SE_02_145100616 | chr7:112449559-112454399 |
Sample_02_1451 | Arter | pulmonary arterial smooth muscle cells_PAH1_sictrl | 616 | 1 | 145 | 15 | 1 | 0 | 236 | IFRD1,LSMEM1 |
| SE_02_117400812 | chr7:112449640-112463231 |
Sample_02_1174 | Brain | GBM02 | 812 | 4 | 368 | 52 | 4 | 0 | 500 | IFRD1,LSMEM1 |
| SE_02_085400742 | chr7:112449723-112462322 |
Sample_02_0854 | Glioblastoma | Glioblastoma neurosphere cell_HF-2354 | 742 | 2 | 337 | 47 | 2 | 0 | 471 | IFRD1,LSMEM1 |
| SE_02_055100074 | chr7:112449726-112465720 |
Sample_02_0551 | Other | Aska-BAF47KO1 shSSX | 74 | 3 | 423 | 65 | 4 | 0 | 500 | IFRD1,LSMEM1 |
| SE_02_142500778 | chr7:112449837-112454502 |
Sample_02_1425 | Shoulder | fibroblast_384 | 778 | 2 | 135 | 15 | 1 | 0 | 236 | IFRD1,LSMEM1 |
| SE_02_145500808 | chr7:112449894-112454359 |
Sample_02_1455 | Arter | pulmonary arterial smooth muscle cells_PAH2_sialdh1a3 | 808 | 1 | 132 | 15 | 1 | 0 | 236 | IFRD1,LSMEM1 |
| SE_02_145400766 | chr7:112449951-112463043 |
Sample_02_1454 | Arter | pulmonary arterial smooth muscle cells_PAH1_sialdh1a3 | 766 | 3 | 348 | 52 | 4 | 0 | 500 | IFRD1,LSMEM1 |
| SE_02_145201150 | chr7:112449982-112454062 |
Sample_02_1452 | Arter | pulmonary arterial smooth muscle cells_PAH2_sictrl | 1150 | 1 | 124 | 15 | 1 | 0 | 236 | IFRD1,LSMEM1 |
| SE_02_064501390 | chr7:112450434-112454387 |
Sample_02_0645 | Tracheobronchial epithelial | HTBE_H1N1_18h | 1390 | 1 | 114 | 10 | 1 | 0 | 187 | IFRD1,LSMEM1 |
| SE_02_141001447 | chr7:112450463-112463436 |
Sample_02_1410 | Brain | GSC6 | 1447 | 2 | 338 | 47 | 4 | 0 | 443 | IFRD1,LSMEM1 |
Genomic distribution of SEs associated with IFRD1