SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000228175
Gene: GEMIN8P4 Gene type: processed_pseudogene
Strand: - External links:
Genomic region: chr1:89993593-89994321 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_122900201 chr1:89864579-89955606 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 201 36 2258 53 4 245 313 LRRC8D,ZNF326,GEMIN8P4
SE_02_045300053 chr1:89872876-90008368 Sample_02_0453 Neuroblastoma SJNB3 53 27 3295 72 7 283 969 LRRC8D,ZNF326,GEMIN8P4
SE_02_008700163 chr1:89880772-89998037 Sample_02_0087 Pancreas MiaPaca2 163 7 2886 63 5 263 749 LRRC8D,ZNF326,GEMIN8P4
SE_02_086300221 chr1:89881530-89953259 Sample_02_0863 Malignant rhaboid tumor TTC1240_empty 221 25 1766 40 2 206 313 LRRC8D,ZNF326,GEMIN8P4
SE_02_050400113 chr1:89881563-89990679 Sample_02_0504 Esophagus KYSE510_1 113 50 2687 57 5 263 368 LRRC8D,ZNF326,GEMIN8P4
SE_02_047900903 chr1:89881795-89957459 Sample_02_0479 Head and neck SCC25 903 25 1855 41 2 214 313 LRRC8D,ZNF326,GEMIN8P4
SE_02_077100199 chr1:89884886-89958264 Sample_02_0771 Ovary OVCA429_shGRHL2 199 32 1775 38 2 207 313 LRRC8D,ZNF326,GEMIN8P4
SE_02_101701003 chr1:89885724-89955566 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 1003 12 1699 37 2 195 313 LRRC8D,ZNF326,GEMIN8P4
SE_02_116200766 chr1:89887867-89954279 Sample_02_1162 Stomach YCC11 766 19 1633 37 2 195 313 LRRC8D,ZNF326,GEMIN8P4
SE_02_103600555 chr1:89889532-90026278 Sample_02_1036 Mammary gland HCC70_XY018 555 41 3282 66 5 252 1104 LRRC8D,ZNF326,GEMIN8P4
SE_01_011501260 chr1:89893904-89938927 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 1260 8 1089 27 0 155 313 LRRC8D,GEMIN8P4
SE_02_003600108 chr1:89897703-89956171 Sample_02_0036 Embryo H7 108 14 1384 27 0 173 313 LRRC8D,ZNF326,GEMIN8P4
SE_01_010500480 chr1:89898252-89940514 Sample_01_0105 Thyroid gland thyroid gland_54y 480 15 994 23 0 149 313 LRRC8D,GEMIN8P4
SE_02_006500034 chr1:89899451-89955932 Sample_02_0065 Embryo KO2-Late_G1 34 8 1335 26 0 172 313 LRRC8D,ZNF326,GEMIN8P4
SE_02_121300757 chr1:89901002-89958812 Sample_02_1213 Brain GBM31 757 10 1346 25 0 183 313 LRRC8D,ZNF326,GEMIN8P4
SE_02_101500626 chr1:89901131-89950633 Sample_02_1015 Embryo H9_ Undifferentiated 626 11 1168 24 0 168 313 LRRC8D,ZNF326,GEMIN8P4
SE_02_006700057 chr1:89903416-89939732 Sample_02_0067 Embryo AzH-G2/M 57 4 842 19 0 149 313 LRRC8D,GEMIN8P4
SE_02_040800598 chr1:89903612-89920582 Sample_02_0408 Kidney G401_Dox 598 2 412 14 0 35 0 LRRC8D,GEMIN8P4
SE_02_008100090 chr1:89903695-89976706 Sample_02_0081 Blood Monocyte-derived_dendritic_cells 90 11 1713 30 1 219 313 LRRC8D,ZNF326,GEMIN8P4
SE_02_086000340 chr1:89903926-89930362 Sample_02_0860 iPSCs SAH_SMARCB1_K364del/+ 340 8 645 16 0 35 0 LRRC8D,GEMIN8P4
SE_02_157200492 chr1:89903972-89954798 Sample_02_1572 iPSCs FiPSC 492 14 1194 24 0 172 313 LRRC8D,ZNF326,GEMIN8P4
SE_02_156700294 chr1:89903998-89956079 Sample_02_1567 iPSCs CiPSC 294 15 1226 24 0 173 313 LRRC8D,ZNF326,GEMIN8P4
SE_02_158100680 chr1:89904037-89920353 Sample_02_1581 Renal OS-LM1 680 7 404 14 0 35 0 LRRC8D,GEMIN8P4
SE_02_157000527 chr1:89904080-89952562 Sample_02_1570 iPSCs EiPSC 527 14 1143 23 0 172 313 LRRC8D,ZNF326,GEMIN8P4
SE_02_126401434 chr1:89904111-89913137 Sample_02_1264 Bone Im-GCT-4072_G34W KO 1434 2 245 12 0 31 0 LRRC8D,GEMIN8P4
SE_02_006400247 chr1:89904132-89913646 Sample_02_0064 Embryo DN-Early_G1 247 4 257 12 0 31 0 LRRC8D,GEMIN8P4
SE_02_006600078 chr1:89904796-89913600 Sample_02_0066 Embryo AzL-S_phase 78 2 241 12 0 31 0 LRRC8D,GEMIN8P4
SE_02_012500817 chr1:89904848-89913621 Sample_02_0125 Embryo Embryonic-stem-cells_Primed 817 2 240 12 0 31 0 LRRC8D,GEMIN8P4
SE_02_147700629 chr1:89905400-89923099 Sample_02_1477 Bone EW-22 629 5 446 13 0 35 0 LRRC8D,GEMIN8P4
SE_02_117200688 chr1:89905531-89933902 Sample_02_1172 Embryo H9 WT 688 7 679 18 0 83 104 LRRC8D,GEMIN8P4,ZNF326
SE_00_001300080 chr1:89905635-89933066 Sample_00_0013 Embryo H9 80 5 661 18 0 35 15 LRRC8D,GEMIN8P4,ZNF326
SE_02_042900483 chr1:89905959-89921717 Sample_02_0429 Kidney 12364284_VHL+ 483 7 380 12 0 35 0 LRRC8D,GEMIN8P4
SE_01_003100307 chr1:89906104-89912498 Sample_01_0031 Skin GM23338 307 3 167 9 0 30 0 LRRC8D,GEMIN8P4
SE_02_086100633 chr1:89906469-89913086 Sample_02_0861 iPSCs SAH_WT 633 4 173 7 0 31 0 LRRC8D,GEMIN8P4
SE_02_003000152 chr1:89906582-89921065 Sample_02_0030 Kidney human kidney proximal tubule cells 152 4 345 9 0 35 0 LRRC8D,GEMIN8P4
SE_02_108400240 chr1:89922104-89955553 Sample_02_1084 Blood KBM7-derived near haploid cells 240 14 765 10 0 137 313 LRRC8D,ZNF326,GEMIN8P4
SE_02_012400498 chr1:89926448-89956837 Sample_02_0124 Embryo Embryonic-stem-cells_Naive 498 3 678 8 0 139 313 LRRC8D,ZNF326,GEMIN8P4
SE_02_006400336 chr1:89928297-89955825 Sample_02_0064 Embryo DN-Early_G1 336 6 621 8 0 137 313 LRRC8D,ZNF326,GEMIN8P4
SE_02_103200518 chr1:89930269-89982071 Sample_02_1032 Head and neck SCC1 JQ1 518 12 1196 16 1 184 313 LRRC8D,ZNF326,GEMIN8P4
SE_02_141001536 chr1:89934615-89987249 Sample_02_1410 Brain GSC6 1536 11 1262 18 2 125 151 LRRC8D,ZNF326,GEMIN8P4
SE_02_149300344 chr1:89935218-89957398 Sample_02_1493 Skin SK-MEL-5_DMSO_6h 344 9 518 5 0 53 106 LRRC8D,ZNF326,GEMIN8P4
SE_02_152100763 chr1:89936071-89958285 Sample_02_1521 Skin A375 DMSO 763 11 510 5 0 39 38 LRRC8D,ZNF326,GEMIN8P4
SE_02_018500331 chr1:89936492-89962607 Sample_02_0185 Skin UACC257 331 6 596 7 0 42 14 ZNF326,GEMIN8P4
SE_02_018400201 chr1:89936565-89962457 Sample_02_0184 Skin SKMEL30 201 9 590 7 0 42 3 ZNF326,GEMIN8P4
SE_02_035900612 chr1:89936727-89955148 Sample_02_0359 Colon Colo741 612 3 427 5 0 26 0 ZNF326,GEMIN8P4
SE_02_018100530 chr1:89936753-89986688 Sample_02_0181 melanoma COLO679 530 12 1195 18 2 81 0 ZNF326,GEMIN8P4
SE_02_030101004 chr1:89937156-89999879 Sample_02_0301 Neuroblastoma GIMEN 1004 10 1526 27 3 83 457 ZNF326,GEMIN8P4
SE_02_017101028 chr1:89937543-89997215 Sample_02_0171 Lung IMR-90_proliferating 1028 8 1450 26 3 83 431 ZNF326,GEMIN8P4
SE_02_102600248 chr1:89937544-89985233 Sample_02_1026 Esophagus KYSE200 248 29 1152 18 2 73 0 ZNF326,GEMIN8P4
SE_02_087900491 chr1:89937550-89981672 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 491 10 1037 13 1 73 0 ZNF326,GEMIN8P4
SE_02_020900524 chr1:89937561-89981942 Sample_02_0209 Lung MRC-5_MRC5_1DPT 524 12 1043 13 1 73 0 ZNF326,GEMIN8P4
SE_02_081100812 chr1:89937713-89987184 Sample_02_0811 Thyroid BCPAP 812 16 1187 18 2 81 0 ZNF326,GEMIN8P4
SE_02_109700220 chr1:89937725-89987299 Sample_02_1097 Haematopoietic and lymphoid tissue 697 220 17 1192 19 2 81 0 ZNF326,GEMIN8P4
SE_02_022800300 chr1:89937729-89990939 Sample_02_0228 Oesophagus KYSE510 300 9 1296 22 3 83 55 ZNF326,GEMIN8P4
SE_02_076201972 chr1:89937805-89997831 Sample_02_0762 Podocyte podocyte_CTL 1972 12 1463 27 3 83 431 ZNF326,GEMIN8P4
SE_02_087801560 chr1:89937824-89955374 Sample_02_0878 Ovary SVOG3e cells_noDox_control 1560 3 408 5 0 26 0 ZNF326,GEMIN8P4
SE_02_061000716 chr1:89937899-89981817 Sample_02_0610 Liposarcoma MLS 1765-92 716 11 1033 13 1 73 0 ZNF326,GEMIN8P4
SE_02_058900257 chr1:89937959-89957444 Sample_02_0589 Cervix HeLa Kyoto_Luci siRNA 257 16 448 5 0 34 0 ZNF326,GEMIN8P4
SE_02_058800617 chr1:89937966-89954659 Sample_02_0588 Cervix HeLa Kyoto_untreated 617 11 391 5 0 26 0 ZNF326,GEMIN8P4
SE_02_040800462 chr1:89937990-89957927 Sample_02_0408 Kidney G401_Dox 462 4 457 5 0 37 0 ZNF326,GEMIN8P4
SE_02_047600684 chr1:89938085-89955687 Sample_02_0476 iPSCs hiPSC derived hepatocyte-like cells 684 13 411 5 0 26 0 ZNF326,GEMIN8P4
SE_02_088100491 chr1:89938088-89981343 Sample_02_0881 Ovary SVOG3e cells_Dox_12h_transduced_V5-FOXL2_WT 491 8 1020 12 1 73 0 ZNF326,GEMIN8P4
SE_02_137901127 chr1:89938092-89954783 Sample_02_1379 Pancreas Pancreatic_tumor_associated_fibroblasts_PS1_untreated 1127 4 392 5 0 26 0 ZNF326,GEMIN8P4
SE_02_044200535 chr1:89938182-89986394 Sample_02_0442 Bone MG63.3 535 26 1162 18 2 80 0 ZNF326,GEMIN8P4
SE_02_149600266 chr1:89938203-89976309 Sample_02_1496 Other monocyte-derived dendritic cells_R848_24h 266 23 890 11 1 70 0 ZNF326,GEMIN8P4
SE_02_075701065 chr1:89942379-89955227 Sample_02_0757 Embryo ES-derived progenitors_FOXA2 -/- 1065 3 299 3 0 23 0 ZNF326,GEMIN8P4
SE_02_059000463 chr1:89942842-89957433 Sample_02_0590 Cervix HeLa Kyoto_Luci PWWP2A siRNA 463 8 328 3 0 29 0 ZNF326,GEMIN8P4
SE_02_036300494 chr1:89949773-89964824 Sample_02_0363 Haematopoietic and lymphoid tissue 697 494 2 342 5 0 23 0 ZNF326,GEMIN8P4
SE_02_076000408 chr1:89950115-89986403 Sample_02_0760 Ovary BIN-67_SMARCA4 408 6 871 14 2 60 0 ZNF326,GEMIN8P4
SE_02_086400424 chr1:89970972-89997831 Sample_02_0864 Malignant rhaboid tumor TTC1240_SMARCB1_K364del 424 10 687 18 3 40 431 ZNF326,GEMIN8P4
SE_02_088601690 chr1:89970982-89998921 Sample_02_0886 Skin foreskin_ p63KLF4 1690 6 714 18 3 40 457 ZNF326,GEMIN8P4
SE_01_005900315 chr1:89971126-89991101 Sample_01_0059 Lung PC-9 315 2 519 13 3 40 55 ZNF326,GEMIN8P4
SE_02_152600243 chr1:89971415-90003860 Sample_02_1526 Lung PC9 DMSO 243 6 816 19 3 40 457 ZNF326,GEMIN8P4
SE_02_077101133 chr1:89971655-90003061 Sample_02_0771 Ovary OVCA429_shGRHL2 1133 10 790 19 3 40 457 ZNF326,GEMIN8P4
SE_02_103500802 chr1:89972441-90001892 Sample_02_1035 Mammary gland HCC70_Vehicle 802 15 753 18 3 37 457 ZNF326,GEMIN8P4
SE_02_040800637 chr1:89973299-89999969 Sample_02_0408 Kidney G401_Dox 637 8 694 18 3 34 457 ZNF326,GEMIN8P4
SE_02_049500408 chr1:89988265-89999670 Sample_02_0495 Islets differentiated hESCs Early LSD1 inhibition PP2 408 3 294 8 1 2 402 ZNF326,GEMIN8P4
Genomic distribution of SEs associated with GEMIN8P4
Genome Browser

The strength of the tissue affected by the gene

Expression of GEMIN8P4

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)