Gene overview
| Strategies/Algorithm: | closest_active | Ensembl ID: | ENSG00000111596 |
| Gene: | CNOT2 | Gene type: | protein_coding |
| Strand: | + | External links: |
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| Genomic region: | chr12:70243002-70354993 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_010500886 | chr12:69986818-70013232 |
Sample_02_0105 | Skin | neonatal_keratinocytes | 886 | 6 | 796 | 106 | 12 | 32 | 0 | RAB3IP,CNOT2 |
| SE_02_037000476 | chr12:69986844-70006886 |
Sample_02_0370 | Skeletal muscle | RH4 | 476 | 5 | 584 | 72 | 10 | 32 | 0 | RAB3IP,CNOT2 |
| SE_02_019400324 | chr12:69986973-69997736 |
Sample_02_0194 | Kidney | Patient_x750T | 324 | 1 | 301 | 39 | 3 | 25 | 0 | RAB3IP,CNOT2 |
| SE_02_130300756 | chr12:70031088-70094528 |
Sample_02_1303 | Lymphoma | RL_tazemetostat | 756 | 22 | 1776 | 227 | 2 | 45 | 0 | CNOT2 |
| SE_02_074300491 | chr12:70067152-70105222 |
Sample_02_0743 | Embryo | ES derived mesoderm_day2 | 491 | 8 | 1040 | 100 | 0 | 15 | 0 | CNOT2 |
| SE_02_044600282 | chr12:70164992-70171287 |
Sample_02_0446 | Bone | osteosarcoma tumor P2 | 282 | 3 | 133 | 21 | 0 | 5 | 0 | CNOT2 |
| SE_02_044700578 | chr12:70165066-70170802 |
Sample_02_0447 | Lung | lung metastasis from primary osteosarcoma tumor M2 | 578 | 4 | 121 | 19 | 0 | 5 | 0 | CNOT2 |
| SE_02_075400593 | chr12:70235997-70246177 |
Sample_02_0754 | Embryo | ES-derived progenitors Pancreatic Progenitors 1 WT | 593 | 3 | 310 | 41 | 0 | 57 | 348 | LINC01481,CNOT2 |
| SE_02_023200714 | chr12:70239893-70275917 |
Sample_02_0232 | Tonsil | ILC3 | 714 | 7 | 849 | 83 | 2 | 87 | 348 | CNOT2 |
| SE_02_103400544 | chr12:70239964-70248281 |
Sample_02_1034 | Blood | AML cell | 544 | 2 | 225 | 25 | 0 | 57 | 348 | LINC01481,CNOT2 |
| SE_02_033800020 | chr12:70240162-70254069 |
Sample_02_0338 | Neuroblastoma | BE2 | 20 | 1 | 348 | 32 | 1 | 65 | 348 | CNOT2 |
| SE_02_023401055 | chr12:70240237-70297670 |
Sample_02_0234 | Tonsil | Th17 | 1055 | 10 | 1378 | 145 | 5 | 150 | 446 | CNOT2 |
| SE_02_130300166 | chr12:70240556-70290203 |
Sample_02_1303 | Lymphoma | RL_tazemetostat | 166 | 10 | 1174 | 121 | 3 | 116 | 387 | LINC01481,CNOT2 |
| SE_02_130200138 | chr12:70240669-70276949 |
Sample_02_1302 | Lymphoma | RL DMSO | 138 | 1 | 854 | 87 | 2 | 83 | 348 | LINC01481,CNOT2 |
| SE_02_146800561 | chr12:70240685-70251349 |
Sample_02_1468 | Blood | HUDEP-2_WT | 561 | 4 | 268 | 25 | 0 | 56 | 348 | LINC01481,CNOT2 |
| SE_02_115300260 | chr12:70240744-70275898 |
Sample_02_1153 | Lymphoma | RL_R1446C_gRNA1 | 260 | 8 | 822 | 82 | 2 | 83 | 348 | LINC01481,CNOT2 |
| SE_02_057601100 | chr12:70240822-70250214 |
Sample_02_0576 | Blood | HEL_sgLKB1e2 | 1100 | 5 | 240 | 23 | 0 | 56 | 348 | LINC01481,CNOT2 |
| SE_02_058001105 | chr12:70240884-70250657 |
Sample_02_0580 | Blood | HEL_sgSIK3e4 | 1105 | 4 | 246 | 22 | 0 | 56 | 348 | LINC01481,CNOT2 |
| SE_02_115200336 | chr12:70240954-70271155 |
Sample_02_1152 | Lymphoma | RL_WT_gRNA1 | 336 | 9 | 717 | 70 | 1 | 81 | 348 | LINC01481,CNOT2 |
| SE_02_115500160 | chr12:70241022-70279709 |
Sample_02_1155 | Lymphoma | RL_R1446C_gRNA1_KDAC005 | 160 | 5 | 913 | 91 | 2 | 106 | 387 | LINC01481,CNOT2 |
| SE_02_130400450 | chr12:70241342-70290311 |
Sample_02_1304 | Lymphoma | RL_lenalidomide_tazemetostat | 450 | 16 | 1162 | 118 | 3 | 116 | 387 | LINC01481,CNOT2 |
| SE_02_021300486 | chr12:70241394-70271790 |
Sample_02_0213 | Burkitts lymphoma of the left maxilla | Raji_JQ1 | 486 | 4 | 732 | 73 | 1 | 81 | 348 | CNOT2 |
| SE_02_006500451 | chr12:70241432-70259768 |
Sample_02_0065 | Embryo | KO2-Late_G1 | 451 | 5 | 463 | 41 | 1 | 73 | 348 | CNOT2 |
| SE_01_003701193 | chr12:70241496-70245334 |
Sample_01_0037 | Liver | hepatocyte | 1193 | 1 | 124 | 13 | 0 | 53 | 348 | CNOT2 |
| SE_02_012500595 | chr12:70241520-70247039 |
Sample_02_0125 | Embryo | Embryonic-stem-cells_Primed | 595 | 1 | 156 | 18 | 0 | 56 | 348 | CNOT2 |
| SE_02_084000818 | chr12:70241523-70269639 |
Sample_02_0840 | Embryo | hNPCs_R1159Q/+ | 818 | 7 | 685 | 67 | 1 | 81 | 348 | LINC01481,CNOT2 |
| SE_00_002700615 | chr12:70241568-70245311 |
Sample_00_0027 | Blood | natural-killer-cell | 615 | 1 | 123 | 13 | 0 | 53 | 348 | CNOT2 |
| SE_02_006700629 | chr12:70241590-70256507 |
Sample_02_0067 | Embryo | AzH-G2/M | 629 | 2 | 383 | 31 | 1 | 72 | 348 | CNOT2 |
| SE_02_101702006 | chr12:70241614-70272586 |
Sample_02_1017 | Embryo | H9_Mesendoderm 24h_Hydroxyurea | 2006 | 5 | 747 | 72 | 1 | 81 | 348 | LINC01481,CNOT2 |
| SE_00_000900691 | chr12:70241622-70245807 |
Sample_00_0009 | Blood | CD8-positive-alpha-beta-T-cell | 691 | 1 | 128 | 12 | 0 | 53 | 348 | CNOT2 |
| SE_02_044600009 | chr12:70241666-70248111 |
Sample_02_0446 | Bone | osteosarcoma tumor P2 | 9 | 3 | 176 | 17 | 0 | 56 | 348 | LINC01481,CNOT2 |
| SE_01_009600600 | chr12:70241691-70270446 |
Sample_01_0096 | B-cell lymphoma | DOHH2 | 600 | 12 | 685 | 65 | 1 | 81 | 348 | LINC01481,CNOT2 |
| SE_02_150800074 | chr12:70242126-70252026 |
Sample_02_1508 | Brain | NGPz_untreat | 74 | 2 | 247 | 18 | 1 | 58 | 348 | LINC01481,CNOT2 |
| SE_02_099900427 | chr12:70243747-70290338 |
Sample_02_0999 | Lymphoma | OCI-LY1_966 | 427 | 22 | 1073 | 107 | 3 | 79 | 157 | CNOT2,LINC01481 |
| SE_02_154600113 | chr12:70244258-70278873 |
Sample_02_1546 | Gastrointestinal Stromal | GIST-430/654 | 113 | 13 | 785 | 78 | 2 | 56 | 64 | CNOT2,LINC01481 |
Genomic distribution of SEs associated with CNOT2