Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000167286
Gene: CD3D Gene type: protein_coding
Strand: - External links:
Genomic region: chr11:118339075-118342705 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104200154 chr11:118306135-118347859 Sample_02_1042 Peripheral blood CD4+ cells_CTCL1137 154 20 1063 74 2 55 1091 CD3D,CD3E,CD3G,UBE4A,MPZL2
SE_02_131300164 chr11:118306504-118353728 Sample_02_1313 Brain hMGLs_CD33_SNP 164 9 1215 84 2 62 1454 CD3D,CD3E,CD3G,MPZL2,UBE4A,ATP5L
SE_02_109900471 chr11:118311157-118353766 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 471 14 1095 73 2 51 1370 CD3D,CD3E,CD3G,MPZL2,UBE4A,ATP5L,MPZL3,RP11-770J1.5,RP11-770J1.4,MLL
SE_02_047600423 chr11:118311493-118350744 Sample_02_0476 iPSCs hiPSC derived hepatocyte-like cells 423 12 1010 66 2 48 1147 CD3D,CD3E,CD3G,UBE4A,MPZL2
SE_02_003900757 chr11:118313422-118330274 Sample_02_0039 Embryo AFG 757 2 423 21 1 26 373 CD3E,UBE4A,CD3G,MPZL2,CD3D
SE_02_131800133 chr11:118313957-118350567 Sample_02_1318 Brain hMGLs_SORL1-A528T 133 7 924 57 1 40 876 CD3D,CD3E,CD3G,UBE4A,MPZL2
SE_02_107000394 chr11:118314802-118346714 Sample_02_1070 Blood SupT1_WT 394 12 798 47 1 20 667 CD3D,CD3E,CD3G,UBE4A
SE_02_131400106 chr11:118315100-118353835 Sample_02_1314 Brain hMGLs_TREM2-KO 106 7 990 63 1 27 1046 CD3D,CD3E,CD3G,UBE4A,ATP5L
SE_02_131700122 chr11:118315208-118353913 Sample_02_1317 Brain hMGLs_SORL1-KO 122 8 985 62 0 27 1053 CD3D,CD3E,CD3G,UBE4A,ATP5L
SE_00_000700253 chr11:118332761-118351096 Sample_00_0007 Blood naive thymus-derived CD4-positive,alpha-beta T cell 253 1 481 39 0 18 629 CD3G,CD3D,CD3E,UBE4A
SE_00_000900494 chr11:118332848-118350975 Sample_00_0009 Blood CD8-positive-alpha-beta-T-cell 494 1 477 39 0 18 629 CD3G,CD3D,CD3E,UBE4A
SE_00_004400482 chr11:118332876-118350760 Sample_00_0044 Cord blood T-cell 482 1 466 38 0 18 618 CD3G,CD3D,CD3E,UBE4A
SE_02_002300191 chr11:118333124-118353183 Sample_02_0023 Blood CD8donorC 191 15 530 41 0 21 768 CD3G,CD3D,CD3E,UBE4A,ATP5L
SE_02_022300125 chr11:118334335-118347753 Sample_02_0223 Haematopoietic and lymphoid tissue MOLT4_1 125 1 345 28 0 14 471 CD3G,CD3D,CD3E,UBE4A
SE_02_003100194 chr11:118334405-118349122 Sample_02_0031 Haematopoietic and lymphoid tissue blood Jurkat 194 2 380 30 0 14 495 CD3G,CD3D,CD3E,UBE4A
SE_02_022500182 chr11:118334474-118346224 Sample_02_0225 Haematopoietic and lymphoid tissue PF-382 182 2 298 26 0 14 471 CD3G,CD3D,CD3E,UBE4A
SE_02_022100199 chr11:118334495-118346306 Sample_02_0221 Blood CCRF-CEM 199 2 299 26 0 14 471 CD3G,CD3D,CD3E,UBE4A
SE_02_014800427 chr11:118334662-118346477 Sample_02_0148 Blood CD8_T_cells 427 3 299 26 0 14 471 CD3G,CD3D,CD3E,UBE4A
SE_02_059100373 chr11:118334666-118348314 Sample_02_0591 PBMCs adult CD4+CD25-CD45RA+CD27+ naive T cells 373 5 346 30 0 14 471 CD3D,CD3G,UBE4A,CD3E
SE_02_045600496 chr11:118334804-118349692 Sample_02_0456 Th17 lymphocytes Th17-IL-10- Day 0 496 4 384 32 0 15 523 CD3D,CD3G,UBE4A,CD3E
SE_02_003400278 chr11:118335126-118346833 Sample_02_0034 Peripheral blood CUTLL1_GSI 278 2 291 24 0 14 471 CD3G,CD3D,CD3E,UBE4A
SE_00_005600923 chr11:118335182-118346669 Sample_00_0056 Sigmoid colon sigmoid colon 3y 923 4 291 24 0 14 471 CD3D,CD3G,UBE4A,CD3E
SE_02_104400362 chr11:118335210-118347888 Sample_02_1044 Peripheral blood CD4+ cells_CTCL409 362 7 320 28 0 14 471 CD3D,CD3G,UBE4A,CD3E
SE_02_045400621 chr11:118335758-118350172 Sample_02_0454 Th17 lymphocytes Th17-IL-10+ Day 0 621 3 366 28 0 15 568 CD3D,CD3G,UBE4A,CD3E
SE_00_000800328 chr11:118336511-118350484 Sample_00_0008 Blood CD4-positive-alpha-beta-memory-T-cell 328 1 354 27 0 16 590 CD3G,CD3D,CD3E,UBE4A
SE_02_130000319 chr11:118337006-118346719 Sample_02_1300 Blood KARPAS-45 319 1 241 20 0 14 471 CD3D,CD3G,UBE4A,CD3E
SE_02_022600199 chr11:118337302-118348106 Sample_02_0226 Blood KOPTK1 199 1 271 24 0 14 471 CD3G,CD3D,CD3E,UBE4A
SE_02_034800182 chr11:118337398-118347481 Sample_02_0348 Peripheral blood CUTLL1_wild-type 182 1 253 21 0 14 471 CD3G,CD3D,CD3E,UBE4A
SE_02_034900169 chr11:118337426-118347316 Sample_02_0349 Peripheral blood CUTLL1_dimer-mutant 169 1 252 21 0 14 471 CD3G,CD3D,CD3E,UBE4A
SE_02_017600439 chr11:118337551-118347649 Sample_02_0176 Peripheral blood LOUCY 439 1 256 20 0 14 471 CD3G,CD3D,CD3E,UBE4A
SE_02_012800226 chr11:118337555-118347373 Sample_02_0128 Haematopoietic and lymphoid tissue ALL-SIL 226 1 248 20 0 14 471 CD3G,CD3D,CD3E,UBE4A
SE_00_004500136 chr11:118337568-118346311 Sample_00_0045 Thymus thymus 136 1 218 18 0 14 471 CD3G,CD3D,CD3E,UBE4A
SE_01_004300253 chr11:118337581-118347695 Sample_01_0043 Blood KOPT-K1 253 1 257 20 0 14 471 CD3G,CD3D,CD3E,UBE4A
SE_02_003500209 chr11:118337597-118346311 Sample_02_0035 Peripheral blood CUTLL1_GSI_wash 209 1 218 18 0 14 471 CD3G,CD3D,CD3E,UBE4A
SE_01_004400491 chr11:118337707-118346347 Sample_01_0044 Haematopoietic and lymphoid tissue Loucy 491 1 215 18 0 14 471 CD3G,CD3D,CD3E,UBE4A
SE_02_013100653 chr11:118337810-118347411 Sample_02_0131 Lung 1015_PT 653 1 244 20 0 14 471 CD3G,CD3D,CD3E,UBE4A
SE_02_013200684 chr11:118337887-118347416 Sample_02_0132 Lung 1015_CL 684 1 243 20 0 14 471 CD3G,CD3D,CD3E,UBE4A
SE_02_111200663 chr11:118337890-118347016 Sample_02_1112 T lymphocyte THP-6 T-ALL 663 1 232 18 0 14 471 CD3D,CD3G,UBE4A,CD3E
SE_02_045700734 chr11:118337901-118346080 Sample_02_0457 Th17 lymphocytes Th17-IL-10- Day 5 734 1 209 18 0 14 471 CD3D,CD3G,UBE4A,CD3E
SE_02_022400181 chr11:118337966-118347677 Sample_02_0224 Haematopoietic and lymphoid tissue P12-ICHIKAWA 181 1 249 20 0 14 471 CD3G,CD3D,CD3E,UBE4A
SE_02_045500720 chr11:118337968-118346775 Sample_02_0455 Th17 lymphocytes Th17-IL-10+ Day 5 720 1 222 18 0 14 471 CD3D,CD3G,UBE4A,CD3E
SE_02_121700135 chr11:118338000-118346642 Sample_02_1217 Blood Jurkat ZBTB1 KO_ZBTB1_expressing FLAG-ZBTB1_Asparagine deprivation 135 2 221 18 0 14 471 CD3D,CD3G,UBE4A,CD3E
SE_02_121600108 chr11:118338035-118347011 Sample_02_1216 Blood Jurkat ZBTB1 KO 108 1 225 17 0 14 471 CD3D,CD3G,UBE4A,CD3E
SE_02_005900227 chr11:118338057-118348844 Sample_02_0059 Haematopoietic and lymphoid tissue blood WT/Jurkat 227 2 276 21 0 14 471 CD3G,CD3D,CD3E,UBE4A
SE_02_006000248 chr11:118338080-118346300 Sample_02_0060 Haematopoietic and lymphoid tissue blood WT-11bp/Jurkat 248 1 206 17 0 14 471 CD3G,CD3D,CD3E,UBE4A
SE_02_005800245 chr11:118338114-118347450 Sample_02_0058 Haematopoietic and lymphoid tissue blood WT/Jurkat-11bp 245 1 236 19 0 14 471 CD3G,CD3D,CD3E,UBE4A
SE_02_121400120 chr11:118338194-118346432 Sample_02_1214 Blood Jurkat ZBTB1 KO_ZBTB1_expressing FLAG-ZBTB1 120 3 208 17 0 14 471 CD3D,CD3G,UBE4A,CD3E
SE_02_121500132 chr11:118338452-118346721 Sample_02_1215 Blood Jurkat ZBTB1 KO_Asparagine deprivation 132 2 216 17 0 14 471 CD3D,CD3G,UBE4A,CD3E

Genomic distribution of SEs associated with CD3D

The strength of the tissue affected by the gene


Expression of CD3D