Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000163492
Gene: CCDC141 Gene type: protein_coding
Strand: - External links:
Genomic region: chr2:178829757-179050086 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_068400352 chr2:178909430-178922885 Sample_02_0684 Lung DMS79 352 11 316 18 0 47 56 CCDC141,TTN
SE_02_099900380 chr2:179016517-179060731 Sample_02_0999 Lymphoma OCI-LY1_966 380 19 1358 175 5 129 85 CCDC141
SE_02_107500171 chr2:179016730-179051443 Sample_02_1075 Lymphoma BC-3 171 10 948 118 3 120 85 CCDC141
SE_02_023200560 chr2:179017193-179051412 Sample_02_0232 Tonsil ILC3 560 9 939 118 3 118 85 CCDC141
SE_02_099800429 chr2:179017472-179060759 Sample_02_0998 Lymphoma OCI-LY1_DMSO 429 32 1336 173 5 127 85 CCDC141
SE_02_023100337 chr2:179017666-179050567 Sample_02_0231 Tonsil ILC1 337 7 890 111 3 107 85 CCDC141
SE_02_127800154 chr2:179017752-179061146 Sample_02_1278 Chordoma UCH1_DMSO_48h 154 6 1341 175 5 126 85 CCDC141
SE_02_142900771 chr2:179017993-179059768 Sample_02_1429 Blood GM12878_WT 771 12 1279 168 5 121 85 CCDC141
SE_02_073300324 chr2:179019289-179060800 Sample_02_0733 Lymphoma L20_Mantle cell lymphoma tissue_THZ1 324 8 1290 169 5 114 85 CCDC141
SE_02_078300450 chr2:179019758-179059548 Sample_02_0783 Blood MEC2 450 11 1227 162 5 113 85 CCDC141
SE_02_073500258 chr2:179019816-179060854 Sample_02_0735 Lymphoma PAR_Mantle cell lymphoma tissue_THZ1 258 9 1279 166 5 114 85 CCDC141
SE_02_073200277 chr2:179019832-179060845 Sample_02_0732 Lymphoma L20_Mantle cell lymphoma tissue_DMSO 277 5 1278 166 5 114 85 CCDC141
SE_02_073400221 chr2:179019887-179060914 Sample_02_0734 Lymphoma PAR_Mantle cell lymphoma tissue_DMSO 221 8 1282 166 5 114 85 CCDC141
SE_02_121800820 chr2:179019949-179059552 Sample_02_1218 Bone marrow Daudi 820 16 1225 161 5 113 85 CCDC141
SE_02_072800458 chr2:179020360-179060746 Sample_02_0728 Lymphoma I10_Mantle cell lymphoma tissue_DMSO 458 8 1264 163 4 111 85 CCDC141
SE_02_092101056 chr2:179020799-179059185 Sample_02_0921 Heart embryonic heart_CS22 1056 9 1190 157 3 107 85 CCDC141
SE_02_092500791 chr2:179020964-179069342 Sample_02_0925 Heart fetal heart_PCW17_12570 791 8 1634 252 11 109 85 CCDC141
SE_02_074600498 chr2:179021399-179059297 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 498 14 1180 156 3 105 85 CCDC141
SE_02_074500611 chr2:179037092-179059221 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 611 5 779 114 2 47 85 CCDC141
SE_01_002300465 chr2:179046769-179060085 Sample_01_0023 Embryo cardiac-muscle-cell 465 2 528 71 2 38 85 CCDC141
SE_02_075700380 chr2:179047221-179060048 Sample_02_0757 Embryo ES-derived progenitors_FOXA2 -/- 380 3 510 70 2 37 75 CCDC141
SE_02_075400359 chr2:179047482-179059536 Sample_02_0754 Embryo ES-derived progenitors Pancreatic Progenitors 1 WT 359 4 482 69 2 31 59 CCDC141
SE_02_004000370 chr2:179047972-179060779 Sample_02_0040 Embryo PFG 370 3 521 72 2 32 53 CCDC141
SE_02_037200399 chr2:179048082-179059120 Sample_02_0372 Skeletal muscle RMS008 399 2 449 66 1 28 53 CCDC141
SE_02_074400268 chr2:179048495-179059200 Sample_02_0744 Embryo ES derived cardiac mesoderm_day5 268 5 435 62 1 28 53 CCDC141
SE_02_003801418 chr2:179048711-179059763 Sample_02_0038 Embryo DE 1418 5 453 63 2 30 53 CCDC141
SE_02_075200976 chr2:179048793-179059296 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 976 1 427 61 1 27 53 CCDC141
SE_02_056000823 chr2:179052025-179058556 Sample_02_0560 iPSCs FX52_Cas9-inactive Tet1_CGG sgRNA 823 7 296 46 0 1 0 CCDC141
SE_01_005100304 chr2:179056917-179060639 Sample_01_0051 Embryo neural-progenitor-cell 304 1 144 14 2 9 0 CCDC141
SE_03_000900502 chr2:179096096-179130941 Sample_03_0009 Lung A549_dexamethasone_3h 502 4 906 82 2 106 829 SESTD1,CCDC141
SE_02_042000409 chr2:179105793-179137744 Sample_02_0420 Pectoralis major muscle LHCN-M2_dox_6h 409 8 808 75 2 104 558 SESTD1,CCDC141

Genomic distribution of SEs associated with CCDC141

The strength of the tissue affected by the gene


Expression of CCDC141