SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000241553
Gene: ARPC4 Gene type: protein_coding
Strand: + External links:
Genomic region: chr3:9792495-9807726 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_017600542 chr3:9775072-9795601 Sample_02_0176 Peripheral blood LOUCY 542 3 625 43 2 102 1245 ARPC4,TADA3,ARPC4-TTLL3,TTLL3,RPUSD3,BRPF1,OGG1,CAMK1
SE_02_131400446 chr3:9776588-9795178 Sample_02_1314 Brain hMGLs_TREM2-KO 446 7 574 43 2 100 1245 ARPC4,ARPC4-TTLL3,TADA3,CAMK1,RPUSD3,BRPF1,TTLL3,OGG1
SE_02_058100533 chr3:9777048-9795811 Sample_02_0581 Blood MOLM13_empty_HG 533 6 578 42 2 102 1245 ARPC4,ARPC4-TTLL3,TADA3,CAMK1,RPUSD3,BRPF1,TTLL3,OGG1
SE_02_133200582 chr3:9777400-9796826 Sample_02_1332 Blood Monomac6_CTRL 582 6 633 43 2 102 1245 ARPC4,ARPC4-TTLL3,TADA3,CAMK1,RPUSD3,BRPF1,TTLL3,OGG1
SE_02_134200118 chr3:9777469-9795498 Sample_02_1342 Blood NB4 118 10 564 40 2 102 1245 ARPC4,ARPC4-TTLL3,TADA3,CAMK1,RPUSD3,BRPF1,TTLL3,OGG1
SE_02_083300585 chr3:9778169-9795225 Sample_02_0833 Bone marrow TEX-HIST1H3F-K27I-2-Rx_cells 585 5 536 39 2 96 1245 ARPC4,ARPC4-TTLL3,TADA3,CAMK1,RPUSD3,BRPF1,TTLL3,OGG1
SE_02_083600785 chr3:9778248-9795796 Sample_02_0836 Bone marrow TEX-HIST1H3H-WT-Rx_cells 785 5 552 37 1 98 1245 ARPC4,ARPC4-TTLL3,TADA3,CAMK1,RPUSD3,BRPF1,TTLL3,OGG1
SE_02_083400843 chr3:9778417-9796216 Sample_02_0834 Bone marrow TEX-HIST1H3F-WT-Rx_cells 843 3 565 37 1 94 1245 ARPC4,ARPC4-TTLL3,TADA3,CAMK1,RPUSD3,BRPF1,TTLL3,OGG1
SE_02_152900865 chr3:9778577-9796248 Sample_02_1529 Peripheral blood neutrophils_0BC75 865 7 561 37 1 94 1245 ARPC4,ARPC4-TTLL3,TADA3,CAMK1,RPUSD3,BRPF1,TTLL3,OGG1
SE_02_134800289 chr3:9778741-9795735 Sample_02_1348 Leukophereses leukophereses_p408 289 3 541 36 1 94 1245 ARPC4,ARPC4-TTLL3,TADA3,CAMK1,RPUSD3,BRPF1,TTLL3,OGG1
SE_02_099400778 chr3:9778943-9795696 Sample_02_0994 Blood MOLM13_SIK3TQ 778 5 536 36 1 93 1245 ARPC4,ARPC4-TTLL3,TADA3,CAMK1,RPUSD3,BRPF1,TTLL3,OGG1
SE_02_121800893 chr3:9779263-9795530 Sample_02_1218 Bone marrow Daudi 893 3 520 36 1 93 1245 ARPC4,ARPC4-TTLL3,TADA3,CAMK1,RPUSD3,BRPF1,TTLL3,OGG1
SE_02_122900743 chr3:9779576-9798101 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 743 11 629 42 1 99 1324 ARPC4,ARPC4-TTLL3,TADA3,CAMK1,RPUSD3,BRPF1,TTLL3,OGG1
SE_04_000100520 chr3:9780155-9795066 Sample_04_0001 Blood heat shocked K562 520 4 474 35 1 89 1167 ARPC4,ARPC4-TTLL3,TADA3,CAMK1,RPUSD3,BRPF1,TTLL3,OGG1
SE_04_000200814 chr3:9781369-9794963 Sample_04_0002 Blood cold shocked K562 814 4 438 32 1 85 1052 ARPC4,ARPC4-TTLL3,TADA3,CAMK1,RPUSD3,BRPF1,TTLL3,OGG1
SE_02_149201112 chr3:9789753-9796879 Sample_02_1492 Peripheral blood CD34+ derived peripheral blood-derived mast cells 1112 1 259 17 1 53 491 ARPC4,ARPC4-TTLL3,TADA3,CAMK1,RPUSD3,OGG1,TTLL3
Genomic distribution of SEs associated with ARPC4
Genome Browser

The strength of the tissue affected by the gene

Expression of ARPC4

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)