SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200814
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr3:9781369-9794963
Size: 13594
Super-enhancer rank 814
Number of SE elements: 4
ChIP density(Case|Control): 41130.0064|2830.2708
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ARPC4 ;
ROSE Overlap ARPC4 ; ARPC4-TTLL3 ; TADA3 ;
ROSE Proximal CAMK1 ; RPUSD3 ; TADA3 ; BRPF1 ; TTLL3 ; OGG1 ;
ROSE Closest ARPC4 ;
Lasso ;
PreSTIGE ;
ABC OGG1 ;
BETA ARPC4 ; TADA3 ; CIDEC ; CAMK1 ; BRPF1 ; OGG1 ; TTLL3 ; CPNE9 ; RPUSD3 ; ARPC4-TTLL3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200814 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers