SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000175906
Gene: ARL4D Gene type: protein_coding
Strand: + External links:
Genomic region: chr17:43398993-43401137 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_050900350 chr17:43359509-43369183 Sample_02_0509 Prostate LNCaP95_shGFP_ETOH 350 2 437 76 3 0 0 ARL4D,LINC00910
SE_02_051400166 chr17:43359748-43369240 Sample_02_0514 Prostate LNCaP95_shARfl_DHT 166 5 424 76 3 0 0 ARL4D,LINC00910
SE_00_001400548 chr17:43383497-43411877 Sample_00_0014 Heart left ventricle heart-left-ventricle 548 4 687 79 0 81 672 ARL4D,LOC100130581,MIR2117
SE_02_021100229 chr17:43383560-43419769 Sample_02_0211 Lung MRC-5_NFD_1DPT 229 5 905 96 0 108 672 ARL4D,LOC100130581,MIR2117
SE_02_032601235 chr17:43383577-43411179 Sample_02_0326 Liver hepatocytes_d3 1235 4 653 75 0 81 672 ARL4D,LOC100130581,MIR2117
SE_01_008200893 chr17:43383699-43411190 Sample_01_0082 Right lobe of liver right-lobe-of-liver 893 4 653 75 0 81 672 ARL4D,LOC100130581,MIR2117
SE_02_006300159 chr17:43384151-43436813 Sample_02_0063 Skin Keratinocytes 159 8 1351 130 1 119 672 ARL4D,LOC100130581,MIR2117,DHX8
SE_02_047900663 chr17:43385308-43429602 Sample_02_0479 Head and neck SCC25 663 11 1135 105 1 108 672 ARL4D,LINC00910,MIR2117
SE_02_113100275 chr17:43385407-43430287 Sample_02_1131 Pancreas T3M4 wt 275 11 1144 105 1 108 672 ARL4D,LINC00910,MIR2117
SE_02_080800586 chr17:43385684-43410486 Sample_02_0808 Ovary RMG1_ARID1A KO 586 18 583 70 0 81 672 ARL4D,LINC00910,MIR2117
SE_02_025200105 chr17:43385770-43420965 Sample_02_0252 Neuroblastoma IMR5-75-shMYCN-MYCN_high 105 5 888 92 0 108 672 ARL4D,LOC100130581,MIR2117
SE_02_027700135 chr17:43385906-43432183 Sample_02_0277 Retina FW18 135 5 1181 111 1 116 672 ARL4D,LOC100130581,MIR2117
SE_01_002000706 chr17:43386805-43402053 Sample_01_0020 Blood B-cell 706 2 353 41 0 54 672 ARL4D,LOC100130581,MIR2117
SE_03_001300358 chr17:43386807-43420179 Sample_03_0013 Lung A549 358 5 836 87 0 108 672 ARL4D,LOC100130581,MIR2117
SE_03_001400179 chr17:43386830-43420096 Sample_03_0014 Lung A549_dexamethasone_2h 179 4 831 87 0 108 672 ARL4D,LOC100130581,MIR2117
SE_03_000700244 chr17:43386856-43420180 Sample_03_0007 Lung A549_dexamethasone_12h 244 5 834 87 0 108 672 ARL4D,LOC100130581,MIR2117
SE_03_001000339 chr17:43386871-43419949 Sample_03_0010 Lung A549_dexamethasone_1h 339 5 825 87 0 108 672 ARL4D,LOC100130581,MIR2117
SE_03_001600306 chr17:43386874-43420013 Sample_03_0016 Lung A549_dexamethasone_6h 306 4 827 87 0 108 672 ARL4D,LOC100130581,MIR2117
SE_03_001500252 chr17:43386882-43420054 Sample_03_0015 Lung A549_dexamethasone_8h 252 5 830 87 0 108 672 ARL4D,LOC100130581,MIR2117
SE_02_003300608 chr17:43386913-43419842 Sample_02_0033 Pancreas pancreatic-islets-F 608 6 818 87 0 108 672 ARL4D,LOC100130581,MIR2117
SE_02_048101995 chr17:43387096-43403431 Sample_02_0481 Mammary gland MDA-MB231 1995 8 380 43 0 60 672 ARL4D,LINC00910,MIR2117
SE_02_029600558 chr17:43387137-43419433 Sample_02_0296 Neuroblastoma CLB-BER-Lud 558 4 795 83 0 108 672 ARL4D,LOC100130581,MIR2117
SE_02_031200576 chr17:43387281-43420078 Sample_02_0312 Neuroblastoma SK-N-BE_2-C 576 4 822 84 0 108 672 ARL4D,LOC100130581,MIR2117
SE_02_030300090 chr17:43387529-43420270 Sample_02_0303 Neuroblastoma LAN1 90 4 819 84 0 108 672 ARL4D,LOC100130581,MIR2117
SE_02_004700506 chr17:43387879-43420848 Sample_02_0047 Pancreatic endoderm IIDP/donor790 506 5 823 85 0 108 658 ARL4D,LOC100130581,MIR2117
SE_00_004300043 chr17:43387914-43432134 Sample_00_0043 Stomach stomach_96d 43 7 1116 104 1 116 651 ARL4D,LOC100130581,MIR2117
SE_02_004800336 chr17:43387938-43408158 Sample_02_0048 Embryo endodermal CyT49_HE 336 4 460 53 0 73 646 ARL4D,LOC100130581,MIR2117
SE_00_001500442 chr17:43387974-43419626 Sample_00_0015 Lung IMR-90 442 6 775 83 0 108 641 ARL4D,LOC100130581,MIR2117
SE_00_003800131 chr17:43388001-43419590 Sample_00_0038 Spinal cord spinal-cord_108d 131 5 773 83 0 108 638 ARL4D,LOC100130581,MIR2117
SE_00_004100187 chr17:43388061-43403326 Sample_00_0041 Stomach stomach_3y 187 6 344 41 0 60 632 ARL4D,LOC100130581,MIR2117
SE_02_004300038 chr17:43388066-43419641 Sample_02_0043 Embryo endodermal CyT49_ES_D2 38 11 772 82 0 108 632 ARL4D,LOC100130581,MIR2117
SE_02_103501336 chr17:43391157-43432735 Sample_02_1035 Mammary gland HCC70_Vehicle 1336 16 1060 96 1 116 442 ARL4D,MIR2117,LINC00910
SE_02_103601317 chr17:43391175-43436945 Sample_02_1036 Mammary gland HCC70_XY018 1317 18 1177 110 1 119 442 ARL4D,DHX8,MIR2117,LINC00910
SE_02_044400972 chr17:43392000-43432183 Sample_02_0444 Bone osteosarcoma tumor P10 972 10 1023 92 1 116 442 ARL4D,MIR2117,LINC00910
SE_02_114500795 chr17:43392121-43427815 Sample_02_1145 Peripheral nerve SNF02.2_PRC2 WT 795 19 914 83 1 108 442 ARL4D,MIR2117,LINC00910
SE_02_047600858 chr17:43392440-43419206 Sample_02_0476 iPSCs hiPSC derived hepatocyte-like cells 858 10 656 70 0 108 442 ARL4D,MIR2117,LINC00910
SE_02_110700336 chr17:43392476-43431901 Sample_02_1107 Brain SK-N-AS 336 11 1006 90 1 116 442 ARL4D,MIR2117,LINC00910
SE_02_110500885 chr17:43392915-43427727 Sample_02_1105 Brain NBL-S 885 13 896 80 1 108 442 ARL4D,MIR2117,LINC00910
SE_02_031100310 chr17:43392958-43443204 Sample_02_0311 Neuroblastoma SK-N-AS 310 5 1317 123 1 126 442 ARL4D,MIR2117,LOC100130581,DHX8
SE_04_001000565 chr17:43393228-43450328 Sample_04_0010 Lung A549 TGFb 565 9 1516 152 2 149 504 ARL4D,MIR2117,DHX8,LINC00910
SE_02_108700198 chr17:43393351-43450314 Sample_02_1087 Mammary gland T47D_shCtrl_shRING1B_0 198 20 1515 151 2 149 504 ARL4D,MIR2117,DHX8,LINC00910
SE_02_030101097 chr17:43393374-43432213 Sample_02_0301 Neuroblastoma GIMEN 1097 6 995 87 1 116 442 ARL4D,MIR2117,LOC100130581
SE_02_030200104 chr17:43393468-43420750 Sample_02_0302 Neuroblastoma IMR32 104 6 692 67 0 108 442 ARL4D,MIR2117,LOC100130581
SE_02_108300660 chr17:43393593-43425651 Sample_02_1083 Macula macula 660 7 816 73 1 108 442 ARL4D,MIR2117,LINC00910
SE_02_096700885 chr17:43393606-43432439 Sample_02_0967 Brain H3.3K27M_JN57 885 6 994 86 1 116 442 ARL4D,MIR2117,LINC00910
SE_02_105000485 chr17:43393698-43435364 Sample_02_1050 Highly metastatic osteosarcoma MG63-3_DMSO 485 13 1078 94 1 118 442 ARL4D,DHX8,MIR2117,LINC00910
SE_02_053301241 chr17:43393700-43419853 Sample_02_0533 Blood vessel Circle of Willis_54y 1241 9 655 66 0 108 442 ARL4D,MIR2117,LINC00910
SE_02_050500831 chr17:43393738-43420614 Sample_02_0505 Esophagus KYSE70_1 831 15 679 66 0 108 442 ARL4D,MIR2117,LINC00910
SE_02_058600500 chr17:43393750-43432847 Sample_02_0586 Chordal patient-derived chordoma MGH_4 500 10 1010 87 1 116 442 ARL4D,MIR2117,LINC00910
SE_02_001000658 chr17:43393790-43449710 Sample_02_0010 Kidney A-498_emptyvector 658 11 1492 149 2 134 504 ARL4D,MIR2117,LOC100130581,DHX8
SE_02_127800849 chr17:43393802-43420344 Sample_02_1278 Chordoma UCH1_DMSO_48h 849 7 673 66 0 108 442 ARL4D,MIR2117,LINC00910
SE_02_132800693 chr17:43393847-43432274 Sample_02_1328 Non-mineralized aortic valves aortic valve interstitial cells 693 7 985 86 1 116 442 ARL4D,MIR2117,LINC00910
SE_02_158400956 chr17:43393848-43433013 Sample_02_1584 Brain U87 GBM_Mock 956 10 1011 87 1 116 442 ARL4D,MIR2117,LINC00910
SE_02_026800338 chr17:43393943-43436157 Sample_02_0268 Kidney A-498 338 11 1091 98 1 119 442 ARL4D,MIR2117,LOC100130581,DHX8
SE_02_108200645 chr17:43393998-43420021 Sample_02_1082 Retina retina 645 10 658 66 0 108 442 ARL4D,MIR2117,LINC00910
SE_02_031300274 chr17:43394045-43420055 Sample_02_0313 Neuroblastoma SK-N-DZ 274 3 658 66 0 108 442 ARL4D,MIR2117,LOC100130581
SE_02_075500990 chr17:43394092-43407816 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 990 3 314 35 0 73 442 ARL4D,MIR2117,LINC00910
SE_01_010700832 chr17:43394106-43434046 Sample_01_0107 Esophagus esophagus squamous epithelium 832 11 1033 90 1 118 442 ARL4D,DHX8,MIR2117,LINC00910
SE_02_075200296 chr17:43394135-43419596 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 296 7 632 65 0 107 442 ARL4D,MIR2117,LINC00910
SE_02_150201079 chr17:43394137-43438978 Sample_02_1502 Brain SHEP-21N_DOX_24h_NOSPIKE 1079 15 1170 104 1 118 442 ARL4D,DHX8,MIR2117,LINC00910
SE_02_086701323 chr17:43394150-43420714 Sample_02_0867 Bone marrow Bone marrow derived hMSC_d0 1323 13 675 66 0 107 442 ARL4D,MIR2117,LINC00910
SE_02_050600531 chr17:43394151-43427544 Sample_02_0506 Esophagus TE5_1 531 7 864 78 1 107 442 ARL4D,MIR2117,LINC00910
SE_02_051700546 chr17:43394153-43421767 Sample_02_0517 Esophagus TE5 546 7 700 67 0 107 442 ARL4D,MIR2117,LINC00910
SE_02_046501204 chr17:43394191-43429628 Sample_02_0465 Adipose subcutaneous adipocytes 1204 12 915 78 1 107 442 ARL4D,MIR2117,LINC00910
SE_02_046601080 chr17:43394229-43432782 Sample_02_0466 Adipose visceral adipocytes 1080 18 995 86 1 115 442 ARL4D,MIR2117,LINC00910
SE_02_044200542 chr17:43394234-43435762 Sample_02_0442 Bone MG63.3 542 23 1074 95 1 117 442 ARL4D,DHX8,MIR2117,LINC00910
SE_02_147500894 chr17:43394365-43439540 Sample_02_1475 Bone CHLA-25 894 12 1176 103 1 125 442 ARL4D,DHX8,MIR2117,LINC00910
SE_02_123500665 chr17:43394394-43419543 Sample_02_1235 Brain Neuroblastoma PDX tumour cells 665 6 627 63 0 107 442 ARL4D,MIR2117,LINC00910
SE_02_045200758 chr17:43394430-43420795 Sample_02_0452 Skin hTERT immortalised human skin fibroblasts_Non-tumourigenic 758 7 674 64 0 107 442 ARL4D,MIR2117,LINC00910
SE_02_007200023 chr17:43394865-43431595 Sample_02_0072 Lung NCI-H82_DMSO 23 11 951 82 1 107 442 ARL4D,MIR2117,LOC100130581
SE_02_030400386 chr17:43397550-43420216 Sample_02_0304 Neuroblastoma N206 386 3 593 59 0 100 442 ARL4D,MIR2117,LOC100130581
SE_02_031500269 chr17:43397978-43419814 Sample_02_0315 Neuroblastoma TR14 269 4 568 57 0 99 442 ARL4D,MIR2117,LOC100130581
SE_02_033900324 chr17:43398212-43418597 Sample_02_0339 Neuroblastoma NGP 324 5 519 54 0 95 442 ARL4D,MIR2117,LOC100130581
SE_02_022000361 chr17:43398286-43418263 Sample_02_0220 Brain BE2C_1 361 4 514 54 0 95 442 ARL4D,MIR2117,LOC100130581
SE_02_010800671 chr17:43398315-43436621 Sample_02_0108 Fallopian tube FT246 671 6 1011 88 1 110 442 ARL4D,MIR2117,LOC100130581,DHX8
SE_02_065201144 chr17:43398962-43420327 Sample_02_0652 Tracheobronchial epithelial HTBE_H3N2_mock 1144 6 561 53 0 94 411 ARL4D,MIR2117,LINC00910
SE_02_154100724 chr17:43398984-43429785 Sample_02_1541 Nasopharyngeal HNE1 724 8 816 66 1 94 405 ARL4D,MIR2117,LINC00910
SE_02_151600880 chr17:43400373-43420228 Sample_02_1516 Non-transformed mammary epithelial IMEC MYC 880 9 529 48 0 64 143 ARL4D,MIR2117,LINC00910
SE_02_113300677 chr17:43400650-43436001 Sample_02_1133 Liver Hepatic stellate cells 677 6 943 80 1 72 90 ARL4D,DHX8,MIR2117,LINC00910
SE_01_011501146 chr17:43400852-43420178 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 1146 8 513 48 0 60 59 ARL4D,MIR2117,LINC00910
SE_02_063800957 chr17:43400868-43436607 Sample_02_0638 Fibroblast HGPS fibroblast_LMNA_AG11498 957 15 950 80 1 71 58 ARL4D,DHX8,MIR2117,LINC00910
SE_02_074400856 chr17:43402106-43417895 Sample_02_0744 Embryo ES derived cardiac mesoderm_day5 856 7 411 41 0 50 0 ARL4D,MIR2117,LINC00910
SE_02_058800722 chr17:43406709-43436209 Sample_02_0588 Cervix HeLa Kyoto_untreated 722 11 807 67 1 55 0 ARL4D,DHX8,MIR2117,LINC00910,LOC100130581
Genomic distribution of SEs associated with ARL4D
Genome Browser

The strength of the tissue affected by the gene

Expression of ARL4D

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)