SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000164091
Gene: WDR82 Gene type: protein_coding
Strand: - External links:
Genomic region: chr3:52254434-52288020 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_103501562 chr3:52263831-52285946 Sample_02_1035 Mammary gland HCC70_Vehicle 1562 8 482 45 1 0 388 WDR82,MIRLET7G,PPM1M,TLR9,MIR135A1,GLYCTK-AS1,GLYCTK,DNAH1,TWF2
SE_00_000901025 chr3:52266573-52280919 Sample_00_0009 Blood CD8-positive-alpha-beta-T-cell 1025 1 319 25 0 0 388 WDR82,MIRLET7G,PPM1M,TLR9,MIR135A1,GLYCTK,DNAH1,TWF2
SE_00_000700561 chr3:52266577-52280907 Sample_00_0007 Blood naive thymus-derived CD4-positive,alpha-beta T cell 561 1 319 25 0 0 388 WDR82,MIRLET7G,PPM1M,TLR9,MIR135A1,GLYCTK,DNAH1,TWF2
SE_00_000800557 chr3:52266644-52281125 Sample_00_0008 Blood CD4-positive-alpha-beta-memory-T-cell 557 1 322 26 0 0 388 WDR82,MIRLET7G,PPM1M,TLR9,MIR135A1,GLYCTK,DNAH1,TWF2
SE_01_008500658 chr3:52268849-52290935 Sample_01_0085 Stomach stomach 658 4 501 48 1 0 501 GLYCTK,WDR82,PPM1M,TLR9,MIR135A1,MIRLET7G,DNAH1,TWF2
SE_02_067200109 chr3:52269129-52285352 Sample_02_0672 Endometrium endometrium cancer_DSG 109 1 351 34 1 0 230 WDR82,PPM1M,TLR9,MIR135A1,GLYCTK-AS1,MIRLET7G,GLYCTK,DNAH1,TWF2
SE_02_045400788 chr3:52269234-52281102 Sample_02_0454 Th17 lymphocytes Th17-IL-10+ Day 0 788 1 270 24 0 0 230 WDR82,PPM1M,TLR9,MIR135A1,GLYCTK-AS1,MIRLET7G,GLYCTK,DNAH1,TWF2
SE_02_156001167 chr3:52269355-52281034 Sample_02_1560 Gastrointestinal Stromal GIST-9_PDGFRA e18 1167 4 268 24 0 0 230 WDR82,PPM1M,TLR9,MIR135A1,GLYCTK-AS1,MIRLET7G,GLYCTK,DNAH1,TWF2
SE_02_076000920 chr3:52269450-52280792 Sample_02_0760 Ovary BIN-67_SMARCA4 920 3 258 23 0 0 230 WDR82,PPM1M,TLR9,MIR135A1,GLYCTK-AS1,MIRLET7G,GLYCTK,DNAH1,TWF2
SE_01_008700850 chr3:52269564-52288872 Sample_01_0087 Thyroid gland thyroid-gland 850 4 436 43 1 0 322 GLYCTK,WDR82,PPM1M,TLR9,MIR135A1,MIRLET7G,DNAH1,TWF2
SE_02_045700752 chr3:52269742-52283806 Sample_02_0457 Th17 lymphocytes Th17-IL-10- Day 5 752 9 305 26 1 0 230 WDR82,PPM1M,TLR9,MIR135A1,GLYCTK-AS1,MIRLET7G,GLYCTK,DNAH1,TWF2
SE_02_146001442 chr3:52269744-52282435 Sample_02_1460 Blood Mutz-3 1442 4 280 26 1 0 230 WDR82,PPM1M,TLR9,MIR135A1,GLYCTK-AS1,MIRLET7G,GLYCTK,DNAH1,TWF2
SE_01_008200603 chr3:52269799-52291166 Sample_01_0082 Right lobe of liver right-lobe-of-liver 603 6 489 49 1 0 547 GLYCTK,WDR82,PPM1M,TLR9,MIR135A1,MIRLET7G,DNAH1,TWF2
SE_01_007900428 chr3:52269815-52291607 Sample_01_0079 Peyers patch Peyers-patch 428 5 497 49 1 0 593 GLYCTK,WDR82,PPM1M,TLR9,MIR135A1,MIRLET7G,DNAH1,TWF2
SE_02_045500689 chr3:52269873-52283796 Sample_02_0455 Th17 lymphocytes Th17-IL-10+ Day 5 689 6 304 26 1 0 230 WDR82,PPM1M,TLR9,MIR135A1,GLYCTK-AS1,MIRLET7G,GLYCTK,DNAH1,TWF2
SE_02_014800477 chr3:52269899-52283097 Sample_02_0148 Blood CD8_T_cells 477 3 287 26 1 0 230 WDR82,PPM1M,TLR9,MIR135A1,MIRLET7G,GLYCTK,DNAH1,TWF2
SE_02_093500565 chr3:52270108-52283012 Sample_02_0935 Retinal Pigmented Epithelial RPE188_Con 565 8 284 26 1 0 230 WDR82,PPM1M,TLR9,MIR135A1,GLYCTK-AS1,MIRLET7G,GLYCTK,DNAH1,TWF2
SE_00_005501065 chr3:52270117-52282659 Sample_00_0055 Spleen spleen 34y 1065 4 279 26 1 0 230 WDR82,PPM1M,TLR9,MIR135A1,GLYCTK-AS1,MIRLET7G,GLYCTK,DNAH1,TWF2
SE_02_119300616 chr3:52270122-52283981 Sample_02_1193 Brain GBM27 616 6 300 27 1 0 230 WDR82,PPM1M,TLR9,MIR135A1,GLYCTK-AS1,MIRLET7G,GLYCTK,DNAH1,TWF2
SE_02_059300508 chr3:52270158-52282620 Sample_02_0593 Fetal spleenocytes fetal naive T cells 508 6 276 26 1 0 230 WDR82,PPM1M,TLR9,MIR135A1,GLYCTK-AS1,MIRLET7G,GLYCTK,DNAH1,TWF2
SE_02_108200884 chr3:52270183-52280503 Sample_02_1082 Retina retina 884 5 234 21 0 0 230 WDR82,PPM1M,TLR9,MIR135A1,GLYCTK-AS1,MIRLET7G,GLYCTK,DNAH1,TWF2
SE_02_002300416 chr3:52270353-52283765 Sample_02_0023 Blood CD8donorC 416 14 290 26 1 0 230 WDR82,PPM1M,TLR9,MIR135A1,MIRLET7G,GLYCTK,DNAH1,TWF2
SE_02_040800356 chr3:52270587-52285565 Sample_02_0408 Kidney G401_Dox 356 3 320 32 1 0 223 WDR82,PPM1M,TLR9,MIR135A1,MIRLET7G,GLYCTK,DNAH1,TWF2
SE_02_040900358 chr3:52270667-52285472 Sample_02_0409 Kidney G401_NoDox 358 2 314 32 1 0 221 WDR82,PPM1M,TLR9,MIR135A1,MIRLET7G,GLYCTK,DNAH1,TWF2
SE_02_074600950 chr3:52270743-52283714 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 950 3 279 26 1 0 216 WDR82,PPM1M,TLR9,MIR135A1,GLYCTK-AS1,MIRLET7G,GLYCTK,DNAH1,TWF2
SE_02_025700107 chr3:52271270-52291737 Sample_02_0257 Endometrioid endometrioid_adenocarcinoma_TumorA 107 1 462 48 1 0 593 GLYCTK,WDR82,PPM1M,TLR9,MIR135A1,MIRLET7G,DNAH1,TWF2
SE_02_039700069 chr3:52271643-52292145 Sample_02_0397 Mammary gland CAL51-MCF-7 69 7 465 48 1 0 693 GLYCTK,WDR82,PPM1M,TLR9,MIR135A1,MIRLET7G,DNAH1,TWF2
SE_02_081800854 chr3:52272983-52281119 Sample_02_0818 Ovary High-grade serous ovarian cancer 854 1 166 20 0 0 197 WDR82,PPM1M,TLR9,MIR135A1,GLYCTK-AS1,MIRLET7G,GLYCTK,DNAH1,TWF2
SE_02_067400250 chr3:52274135-52281230 Sample_02_0674 Endometrium E1_FA 250 1 150 18 1 0 197 WDR82,PPM1M,TLR9,MIR135A1,GLYCTK-AS1,MIRLET7G,GLYCTK,DNAH1,TWF2
SE_02_036500225 chr3:52275380-52284629 Sample_02_0365 Skeletal muscle NCI0075 225 2 186 19 1 0 197 WDR82,PPM1M,TLR9,MIR135A1,MIRLET7G,GLYCTK,DNAH1,TWF2
SE_02_148100815 chr3:52275600-52288998 Sample_02_1481 Bone MIC 815 5 293 30 1 0 289 GLYCTK,WDR82,GLYCTK-AS1,PPM1M,TLR9,MIR135A1,MIRLET7G,DNAH1,TWF2
SE_00_003900351 chr3:52276245-52288821 Sample_00_0039 Spleen spleen_3y 351 4 273 28 1 0 289 GLYCTK,WDR82,PPM1M,MIR135A1,MIRLET7G,DNAH1,TWF2
SE_00_002501014 chr3:52276961-52288634 Sample_00_0025 Muscle of leg muscle-of-leg 1014 2 250 24 1 0 289 GLYCTK,WDR82,PPM1M,MIR135A1,MIRLET7G,DNAH1,TWF2
SE_02_081601542 chr3:52277124-52280938 Sample_02_0816 Ovary Clear cell ovarian cancer 1542 1 76 7 0 0 197 WDR82,PPM1M,MIR135A1,GLYCTK-AS1,MIRLET7G,GLYCTK,DNAH1,TWF2
SE_02_081700913 chr3:52277134-52281089 Sample_02_0817 Ovary Epithelial ovarian cancer 913 1 80 8 0 0 197 WDR82,PPM1M,MIR135A1,GLYCTK-AS1,MIRLET7G,GLYCTK,DNAH1,TWF2
SE_00_002600695 chr3:52277169-52288529 Sample_00_0026 Muscle of trunk muscle-of-trunk 695 2 244 24 1 0 289 GLYCTK,WDR82,PPM1M,MIR135A1,MIRLET7G,DNAH1,TWF2
SE_02_079900444 chr3:52277736-52281046 Sample_02_0799 Brain MESMN1 444 1 68 8 0 0 197 WDR82,PPM1M,MIR135A1,GLYCTK-AS1,MIRLET7G,GLYCTK,DNAH1,TWF2
Genomic distribution of SEs associated with WDR82
Genome Browser

The strength of the tissue affected by the gene

Expression of WDR82

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)